Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00839 ATGGCGTCGAAGTCTCCGCCTCTGCCCCCTCATCCGCCTTTCGCCTCTTCTTCTAGATCAGAGCTTCCCGTCGATCCATCCGGAAACAAAGCGGAGGAAGTGACTCCGACAGTTAAAGATGTGTCAATGGTTATTGATTCTTTAAAGAAACAAGTTGCTGCAGAACGAATTGTTTCCGTAAAGAAAAGAATGGAAGAAAATAGGCACAAGCTGGTTGGTGTCACAAACCACCTCTGCAGATTGTCAATGGAGAGGATGGCATGTAATGAAACTGATACACATAGAAGTCTGGACCTTTTAACAAAGCGGCAAAAGGATGCAATTGATATGCACAATGGTGTTCTTGCAAGTAGTGATGATGGGGAGAGCAATAGTTATCCTGAAGATGGTCATGGTTCTACAGCAGTTCTTCTGGGATCTAATGTTGCTGTGAAGAATGCTGTTCGTCCTATCAAGTTACCAGAAGTCAAAAGATTACCTCCTTACACCACATGGATATTTCTGGACAGAAATCAAAGAATGACAGAAGATCAGTCAGTTGTAGGTCGTAGACGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATTTGCAGTGACAGTGAAGAGGAAATAATAGATGATGAAGAGGAAAAAAGAGAGTTTGTAGATTCAGAAGATTATATACTTCGCATGACCGTTAGAGAATTGGGTTTATCTGATACTGTTCTGGACTCCTTGGCTCAATGCTTTTCTAGAAATACTAGTGAAATTAAGGCCAGATATGAAACTCTTAGTAACAAAGACAATGCTGCTAGGGGTTCCAAGAATGGAGATACCGAAGATATTTCTCAAAGTGAAAAGTCTTTTCTGGAAAAAGATCTTGAAGCAGCTCTTGACTCCTTTGACAATCTTTTTTGCCGACGCTGTCTTGTTTTCGATTGCCGATTACATGGATGTTCCCAGGATCTTGTCTTCCCCGCTGAGAAGCAACCTCTGTGGAACCCTCCTGATACTGAAAATGCACCATGTGGGCCGAATTGTTTTAAATCGGTACTTAAATCAGGAAGGTTTTCCAAAGCTACCTCTTCTGCCCAGGCTGATGTTGAAGAGAAATGTTCAGGTGGTTCTTCATCTAGGAAGAAGTCTTCTGCTAAAAGGCGCATAAAATGCAGCCAAAGTGAAAGTGCCTCATCTAATGCAAAGAACATATCTGAGAGTAGCGACTCAGAGAATGGGCCTGGAAAGGATGCTGTTTCAGCCTCCCAGTCAGCACCACCTAAAGCTAAACCTGTAGGGAGAGGTGGACTTGGTAAGAGGAACAGCAAGCGGGTGGCAGAACGTGTTCTAGTTTGCATGCAGAAACGGCAGAAGAAAACAGTGGTTTCTGATTCTGATTCCATTGTTGAAGCTCATGATCATTCATCAAATGACATGATCACTGATCCACCTGTCATCAGCAGTGAAGATAATGCAAGGAAAGAAGAGTTTGTGGATGAGAACATTTGTAAACAGGAATCCACTGACAATAAATCCTGGAAAGCTCTTGAAAAAGGACTCCTAGAGAAAGGAATGGAGATATTTGGGAGAAACAGCTGCTTAATAGCCAGGAATCTTCTAAATGGTCTAAAGACATGTTGGGAGGTTTTCCAATACATAAATTGGGATGAAGGAAAGATGTCAGGTTCTGCTGGGGATGGTGCAAATTCTCTTGTGGAAGGCTATTCCAAGGGTAATAATGAAGTGAGACGAAGATCAAGATTTTTACGCAGAAGAGGTAGAGTTCGTCGCTTGAAGTATACCTGGAAATCTGCTGCTTATCATTCAATAAGGAAAAGGATTACAGAGAGAAAGGATCAACCCTGCAGACAGTACAATCCGTGTGGTTGCCAATCAGCTTGTGGAAAGCAGTGTCCATGTCTTCAAAATGGAACCTGCTGTGAGAAATACTGTGGATGCCCGAAGAGTTGCAAGAATCGATTTCGTGGCTGTCACTGTGCGAAGAGTCAATGCCGAAGTCGTCAATGTCCTTGCTTTGCTGCAGATAGGGAATGTGATCCCGATGTTTGTAGGAATTGTTGGGTCAGCTGTGGTGATGGTTCTCTTGGGATACCTAGCCAAAGAGGTGATAATTATGAATGTAGGAACATGAAGCTTCTCCTCAAACAGCAACAAAGGGTTCTTCTTGGAAGGTCTGATGTATCTGGCTGGGGAGCCTTCTTAAAGAATAGTGTTGGTAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTAATTTCTCATCGGGAAGCAGACAAGCGAGGAAAGATATATGACCGAGAAAATTCATCTTTTCTCTTTAATCTAAATGATCAGTTTGTTCTTGATGCTTACCGCAAAGGTGACAAGTTGAAGTTTGCAAACCATGCTCCTGATCCAAATTGCTATGCAAAGGTTATTATGGTTGCTGGAGACCACAGAGTAGGTATATTTGCCAAGGAACGGATAATGGCTGGGGAGGAACTGTTTTACGATTATCGATACGAGCCTGATAGAGCTCCTGCCTGGGCTAGGAAACCAGAGGCATCTGGATCTAAAAAAGAGGACGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCGTAA 2604 0.4282 MASKSPPLPPHPPFASSSRSELPVDPSGNKAEEVTPTVKDVSMVIDSLKKQVAAERIVSVKKRMEENRHKLVGVTNHLCRLSMERMACNETDTHRSLDLLTKRQKDAIDMHNGVLASSDDGESNSYPEDGHGSTAVLLGSNVAVKNAVRPIKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIDDEEEKREFVDSEDYILRMTVRELGLSDTVLDSLAQCFSRNTSEIKARYETLSNKDNAARGSKNGDTEDISQSEKSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPLWNPPDTENAPCGPNCFKSVLKSGRFSKATSSAQADVEEKCSGGSSSRKKSSAKRRIKCSQSESASSNAKNISESSDSENGPGKDAVSASQSAPPKAKPVGRGGLGKRNSKRVAERVLVCMQKRQKKTVVSDSDSIVEAHDHSSNDMITDPPVISSEDNARKEEFVDENICKQESTDNKSWKALEKGLLEKGMEIFGRNSCLIARNLLNGLKTCWEVFQYINWDEGKMSGSAGDGANSLVEGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGSLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHAPDPNCYAKVIMVAGDHRVGIFAKERIMAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00839 867 SMART CXC_2 652 689 IPR033467 -
Arst5g00839 867 Pfam CXC domain 656 687 IPR041355 -
Arst5g00839 867 FunFam Putative histone-lysine N-methyltransferase EZH2 618 835 - -
Arst5g00839 867 SUPERFAMILY SET domain 592 838 IPR046341 -
Arst5g00839 867 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 867 IPR025778 GO:0031519
Arst5g00839 867 MobiDBLite consensus disorder prediction 456 470 - -
Arst5g00839 867 SMART set_7 718 839 IPR001214 GO:0005515
Arst5g00839 867 MobiDBLite consensus disorder prediction 842 860 - -
Arst5g00839 867 MobiDBLite consensus disorder prediction 456 479 - -
Arst5g00839 867 CDD SET_EZH 718 834 - -
Arst5g00839 867 Pfam SET domain 729 832 IPR001214 GO:0005515
Arst5g00839 867 ProSiteProfiles SET domain profile. 718 833 IPR001214 GO:0005515
Arst5g00839 867 MobiDBLite consensus disorder prediction 1 16 - -
Arst5g00839 867 Gene3D SET domain 618 835 IPR046341 -
Arst5g00839 867 ProSiteProfiles CXC domain profile. 604 703 IPR026489 -
Arst5g00839 867 MobiDBLite consensus disorder prediction 357 434 - -
Arst5g00839 867 MobiDBLite consensus disorder prediction 842 867 - -
Arst5g00839 867 MobiDBLite consensus disorder prediction 383 412 - -
Arst5g00839 867 MobiDBLite consensus disorder prediction 1 35 - -
Arst5g00839 867 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 36 865 IPR045318 GO:0006338|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00839 Arst-Chr5 7542538 7548988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00839 707 836 C2H2 Transcription Factor Family AT2G23740 26.531 1.57e-09 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst5g00839 SET 6.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00839 - K11430 gmx:100799832 1513.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00839 5 7542538 7548988 Arst5g00839 5 7542538 7548988 ECH