Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00826 ATGGAGGGTGAAGGAGGTGAGAGAGGGACGAGGAAGAGAGTGGCGGAGAGTGGTGGCGGAGAGAGAAGGTATAAAGGGATAAGGATGAGGAAGTGGGGGAAGTGGGTCGCTGAGATTAGAGAACCAAACAAGCCGCCTCAACTTCCCCGAGCTTCTCGCCGGAGAACCCCCTCCTTCCCTTGTCGGCGCCTGCGACATGTCCGCCGCTTCCATAAGGAAGAAAGCCACCGAGGTCGGCGCCAGAGTCGATGCCCTCCAGGCCGCCACTCTTCACCACCACCACTTAGCTGCGCCGCCGCAGGAGCTTATATCGGGGCGGTCCGGAGATTTTGCGGAGCGGGTTGATTTGAACAAGATACCAGAACCCGAAGATTGTGAATGGGAGATGAATTAA 394 0.5761 MEGEGGERGTRKRVAESGGGERRYKGIRMRKWGKWVAEIREPNKRSRXWLGSYSTPIAAARAYDTAVFYLRGPSARLNFPELLAGEPPPSLVGACDMSAASIRKKATEVGARVDALQAATLHHHHLAAPPQELISGRSGDFAERVDLNKIPEPEDCEWEMN 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00826 161 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Arst5g00826 161 MobiDBLite consensus disorder prediction 1 20 - -
Arst5g00826 161 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Arst5g00826 161 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Arst5g00826 161 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Arst5g00826 161 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Arst5g00826 161 PRINTS Ethylene responsive element binding protein signature 62 82 IPR001471 GO:0003700|GO:0006355
Arst5g00826 161 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 18 157 - -
Arst5g00826 161 FunFam Ethylene-responsive transcription factor 2 22 81 - -
Arst5g00826 161 SUPERFAMILY DNA-binding domain 23 81 IPR016177 GO:0003677
Arst5g00826 161 CDD AP2 23 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00826 Arst-Chr5 7334630 7335570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00826 9 159 AP2-EREBP Transcription Factor Family AT5G67190 56.593 6.92e-55 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst5g00826 AP2 3e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00826 K09286 - gmx:100783682 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00826 5 7334630 7335570 Arst5g00826 5 7334630 7335570 ECH