Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00792 ATGTTGGAGCTCTGTCGAAAACCGTTGATGTGCTTCTTCTCATGTGGACTAGGAGGAGGCAACTATGACGATGAGCTTCTATGGGACTTAGAGTTGAAGCCACACACCGCAGGTGAATATTCAATTGCTGTTGTTCAAGCCAATTCTTCTTTGGAAGACCAAGCACAGGTGTTTACTTCTCCCTTTGCAACTCTTGTTGGTGTTTATGACGGCCATGGTGGACCTGAAGCTTCTCGTTTCATCACCAACCATCTCTTCTCCTTCATTCACATGTTCTCTGCAGAGGATGGTGGGTTATCGGAGCAAGTGATAAAGAAAGCTTTCAGTGCAACTGAAGAGGAGTTCTTGCGTATGGTGAAGCAATCATGGATTTCGCAGCCACACATTGCTTCGGTGGGATCGTGTTGTATTCTTGGAGCAATTTCAAACGATGTTCTCTATGTTGCTAACCTTGGAGACTCGAGGGCAGTTCTCGGTCGCAAAGCATTCGGAGGAAACGAGGTTAGTTGCGGTCATAATGTGGTGGCAGAGCGTTTGTCCACTGATCATAATGTTGGAGTGGAGGAGGTGAGAAAGGAGGTTGAGGCTCTTCACCCTGATGATGATTATGTTGTGGTTAATGCTAATGGAGTTTGGAGAATCAAGGGGATTATTCAGGTCTCAAGATCAATTGGAGATGTTTATCTAAAGAAGCCAGAGTTCGACAACAAGTCTATAATGTTCCAGCAATGTGTGTCCCCGGTACCTTTAAAGAGAGCCGTGATGACGGCGGAGCCATCAATATTAACTCGAAAGTTGAAGGCGGAGGATTTGTTTCTGATCTTCGCATCGGACGGACTTTGGGAGCAATTAACGGACAAAGAAGCCGTTGAAATCGTGTCTAGAAGTCCAAGAAAAGGGATAGCAAAAAGATTGGTGAGAGCTGCACTAGAAGCTGTTGCAAAGAAAAAAGAAATGAGATATAAGGATTTAAAGAAAATTGAGAAAGGTGTAAGGCGCCATTTCCATGATGATATTACAGTGATTGTTATATACCTTGATCATTCACAAAATTCTGTGAATGGTAGTAGGCCAAGACATCAAGGAATCTATGATTCTGTTAATGCTCCTGTAGATATCTACTCTATTAATGCAGATAGGTAA 1143 0.4331 MLELCRKPLMCFFSCGLGGGNYDDELLWDLELKPHTAGEYSIAVVQANSSLEDQAQVFTSPFATLVGVYDGHGGPEASRFITNHLFSFIHMFSAEDGGLSEQVIKKAFSATEEEFLRMVKQSWISQPHIASVGSCCILGAISNDVLYVANLGDSRAVLGRKAFGGNEVSCGHNVVAERLSTDHNVGVEEVRKEVEALHPDDDYVVVNANGVWRIKGIIQVSRSIGDVYLKKPEFDNKSIMFQQCVSPVPLKRAVMTAEPSILTRKLKAEDLFLIFASDGLWEQLTDKEAVEIVSRSPRKGIAKRLVRAALEAVAKKKEMRYKDLKKIEKGVRRHFHDDITVIVIYLDHSQNSVNGSRPRHQGIYDSVNAPVDIYSINADR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00792 380 FunFam Probable protein phosphatase 2C 42 30 354 - -
Arst5g00792 380 SUPERFAMILY PP2C-like 45 348 IPR036457 -
Arst5g00792 380 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Arst5g00792 380 Coils Coil 307 327 - -
Arst5g00792 380 Gene3D - 30 354 IPR036457 -
Arst5g00792 380 Pfam Protein phosphatase 2C 65 312 IPR001932 -
Arst5g00792 380 SMART PP2C_4 31 344 IPR001932 -
Arst5g00792 380 CDD PP2Cc 46 346 IPR001932 -
Arst5g00792 380 PANTHER PROTEIN PHOSPHATASE 38 345 IPR015655 GO:0004722|GO:0006470
Arst5g00792 380 ProSiteProfiles PPM-type phosphatase domain profile. 39 346 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00792 Arst-Chr5 6847796 6850521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00792 24 355 PP2C-type Phosphatase Gene Family AT3G51370 53.959 3.29e-131 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00792 - K01102 gmx:100802394 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00792 5 6847796 6850521 Arst5g00792 5 6847796 6850521 ECH
Arst5g00792 5 6847796 6850521 Arst9g03469 9 111462094 111464400 PCT