Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00788 ATGGTGTATCTCGCCGGGTACCGCACGGTCATAGGATTCCATCACCGGAGCCCAATTTCTTCGATATCGATAACACAAAACGGCGCCACTATAACGCCCTACGACGTCGTATTTCTGTGTCGTTGTTGCAGATACCATCGGTTCAGTAGTGCATCTGAATCTTCTTGGGAAGAATTCCCCGTGGAGAACGCGTACGAGCTGCTAGGAGTGTCGGAGACCAGCTCCTTCGCTGAGATCAAAGCGTCGTTTCACAAATTAGCGAAAGAGACTCACCCGGACCTTGCTGAGTCTAGGAACGATTCCGCTGAGTCGCGCCGATTCGTGCAAATCCTGGCTGCATATGAGATTCTTTCAGATTCTCGGAAGAGAACCCATTATGACATGTATTTGTTGTCCCAGAGAAGGCTCATACAGAGGCATTCCCAACAGGGTTCAAAATTGCACATTTACAAATCCCATGCTAATACTTTCAAGGAGATGGAAGTTGTTGAATGGTTGAAGTGGTACAGATTAACTATAAATGATATTTTGTCAGAGAAGAAGGTGGCTGTTGGAACAGGCTACTTTGATGTGCTTGAGAGAGATTTCTATTCAGCTATTCATGCAGCATATTATGGTCCTGAAATTGATTCTATGCCTATGGAGCTTTTTCCTGACTGCTTTGAGGCTGAGGAAAGGTCCTCTCATGAAACTCCTGAGGTTTTGCACTTGGTTTCCGGTCGGGATCTTTTCGGTATGGTTTGCCTAGCTGAGAAGATTCCGGAGATATCATCTATGAAAAATGAGAAGTTAATTTCTTTCAGATCCTTAGATTCTGACCTGTGCCAATCTACGATGAAGAAATTTCACATCAATGCAGAAAGGCAAGAGGATTTTGGGACACATCGAATTCAAACTTCTAACATTTCAAATAGTGTATCGGATGCATATAGAGATCTAGAATTGCATGTCTCCGGCAGAGTGATTGCTACAGCAACCCGGGACCTACCTAGATGTTATTCCGGTGGGTTGCAGAAAGATGTTGAAGATCACATTCACGTTTTCCTTAATTCGGATGAAGATCCAAAATATATCAGTGGCGACTTTCCAGAACATTACTTGGCCAATGGTGCAGTTGGAAGCAGAATTCATTTGGGAACCATATCTGGAATTGGGAGCACTCCAGATGAAGGTTGTTGTTATGTCTACAACAGCAATGGTGACAAGACCCATGCAATCATGAAACATAGAACATTGCTGGTGAAGCATATGCACTGGTATGAAATCGGTGACAGAGTTTCACTTTGTGAGTGTAGATGCACTAGGGCACGTTTACCACCAAGCAAGTAA 1329 0.4394 MVYLAGYRTVIGFHHRSPISSISITQNGATITPYDVVFLCRCCRYHRFSSASESSWEEFPVENAYELLGVSETSSFAEIKASFHKLAKETHPDLAESRNDSAESRRFVQILAAYEILSDSRKRTHYDMYLLSQRRLIQRHSQQGSKLHIYKSHANTFKEMEVVEWLKWYRLTINDILSEKKVAVGTGYFDVLERDFYSAIHAAYYGPEIDSMPMELFPDCFEAEERSSHETPEVLHLVSGRDLFGMVCLAEKIPEISSMKNEKLISFRSLDSDLCQSTMKKFHINAERQEDFGTHRIQTSNISNSVSDAYRDLELHVSGRVIATATRDLPRCYSGGLQKDVEDHIHVFLNSDEDPKYISGDFPEHYLANGAVGSRIHLGTISGIGSTPDEGCCYVYNSNGDKTHAIMKHRTLLVKHMHWYEIGDRVSLCECRCTRARLPPSK 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00788 442 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 442 - -
Arst5g00788 442 SUPERFAMILY Chaperone J-domain 62 133 IPR036869 -
Arst5g00788 442 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Arst5g00788 442 SMART dnaj_3 62 122 IPR001623 -
Arst5g00788 442 PRINTS DnaJ domain signature 83 98 IPR001623 -
Arst5g00788 442 PRINTS DnaJ domain signature 65 83 IPR001623 -
Arst5g00788 442 PRINTS DnaJ domain signature 102 122 IPR001623 -
Arst5g00788 442 ProSiteProfiles dnaJ domain profile. 63 130 IPR001623 -
Arst5g00788 442 CDD DnaJ 63 119 IPR001623 -
Arst5g00788 442 Gene3D DnaJ domain 54 152 IPR036869 -
Arst5g00788 442 Pfam DnaJ domain 63 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00788 Arst-Chr5 6837388 6840336 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00788 65 127 C2H2 Transcription Factor Family AT1G74250 39.394 3.52e-07 50.8