Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00787 ATGGTGTATCTCGCCGGGTACCGCACGGTCATAGGATTCCATCACCGGAGCCCAATTTCTTCGATATCGATAACACAAAACGGCGCCACTATAACGCCCTACGACGTCGTATTTCTGTGTCGTTGTTGCAGATACCATCGGTTCAGTAGTGCATCTGAATCTTCTTGGGAAGAATTCCCCGTGGAGAACGCGTACGAGCTGCTAGGAGTGTCGGAGACCAGCTCCTTCGCTGAGATCAAAGCGTCGTTTCACAAATTAGCGAAAGAGACTCACCCGGACCTTGCTGAGTCTAGGAACGATTCCGCTGAGTCGCGCCGATTCGTGCAAATCCTGGCTGCATATGAGATTCTTTCAGATTCTCGGAAGAGAACCCATTATGACATGTATTTGTTGTCCCAGAGAAGGCTCATACAGAGGCATTCCCAACAGGGTTCAAAATTGCACATTTACAAATCCCATGCTAATACTTTCAAGGAGATGGAAGTTGTTGAATGGTTGAAGTGGTACAGATTAACTATAAATGATATTTTGTCAGAGAAGAAGGTGGCTGTTGGAACAGGCTACTTTGATGTGCTTGAGAGAGATTTCTATTCAGCTATTCATGCAGCATATTATGGTCCTGAAATTGATTCTATGCCTATGGAGCTTTTTCCTGACTGCTTTGAGGCTGAGGAAAGGTCCTCTCATGAAACTCCTGAGGTTTTGCACTTGGTTTCCGGTCGGGATCTTTTCGGTATGGTTTGCCTAGCTGAGAAGATTCCGGAGATATCATCTATGAAAAATGAGAAGTTAATTTCTTTCAGATCCTTAGATTCTGACCTGTGCCAATCTACGATGAAGAAATTTCACATCAATGCAGAAAGGCAAGAGGATTTTGGGACACATCGAATTCAAACTTCTAACATTTCAAATAGTGTATCGGATGCATATAGAGATCTAGAATTGCATGTCTCCGGCAGAGTGATTGCTACAGCAACCCGGGACCTACCTAGATGTTATTCCGGTGGGTTGCAGAAAGATGTTGAAGATCACATTCACGTTTTCCTTAATTCGGATGAAGATCCAAAATATATCAGTGGCGACTTTCCAGAACATTACTTGGCCAATGGTGCAGTTGGAAGCAGAATTCATTTGGGAACCATATCTGGAATTGGGAGCACTCCAGATGAAGGTTGTTGTTATGTCTACAACAGCAATGGTGACAAGACCCATGCAATCATGAAACATAGAACATTGCTGGTGAAGCATATGCACTGGTATGAAATCGGTGACAGAGTTTCACTTTGTGAGTGTAGATGCACTAGGGCACGTTTACCACCAAGCAATTATACAGGTTTTGGCTATTTGAACCTCGCTCTGGCTTCCATGACATAG 1374 0.4396 MVYLAGYRTVIGFHHRSPISSISITQNGATITPYDVVFLCRCCRYHRFSSASESSWEEFPVENAYELLGVSETSSFAEIKASFHKLAKETHPDLAESRNDSAESRRFVQILAAYEILSDSRKRTHYDMYLLSQRRLIQRHSQQGSKLHIYKSHANTFKEMEVVEWLKWYRLTINDILSEKKVAVGTGYFDVLERDFYSAIHAAYYGPEIDSMPMELFPDCFEAEERSSHETPEVLHLVSGRDLFGMVCLAEKIPEISSMKNEKLISFRSLDSDLCQSTMKKFHINAERQEDFGTHRIQTSNISNSVSDAYRDLELHVSGRVIATATRDLPRCYSGGLQKDVEDHIHVFLNSDEDPKYISGDFPEHYLANGAVGSRIHLGTISGIGSTPDEGCCYVYNSNGDKTHAIMKHRTLLVKHMHWYEIGDRVSLCECRCTRARLPPSNYTGFGYLNLALASMT 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00787 457 SUPERFAMILY Chaperone J-domain 62 133 IPR036869 -
Arst5g00787 457 PRINTS DnaJ domain signature 83 98 IPR001623 -
Arst5g00787 457 PRINTS DnaJ domain signature 65 83 IPR001623 -
Arst5g00787 457 PRINTS DnaJ domain signature 102 122 IPR001623 -
Arst5g00787 457 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Arst5g00787 457 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 443 - -
Arst5g00787 457 SMART dnaj_3 62 122 IPR001623 -
Arst5g00787 457 Pfam DnaJ domain 63 127 IPR001623 -
Arst5g00787 457 ProSiteProfiles dnaJ domain profile. 63 130 IPR001623 -
Arst5g00787 457 CDD DnaJ 63 119 IPR001623 -
Arst5g00787 457 Gene3D DnaJ domain 54 152 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00787 Arst-Chr5 6836937 6840336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00787 65 127 C2H2 Transcription Factor Family AT1G74250 39.394 3.66e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00787 - - gmx:100805332 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00787 5 6836937 6840336 Arst5g00787 5 6836937 6840336 ECH