Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00771 ATGAGTTGCAACGGGTGCCGAGTCCTTAGGAAGGGTTGCAGCGAGTCATGCATCTTAAGGCCATGCCTTCAGTGGATCGAAACCGCCGAGGCCCAAGGCCACGCCACCGTCTTCGTGGCCAAATTCTTTGGTCGCGCCGGCCTCATGTCCTTCATTTCCAATGTCCCTGAGCCCCAAAGACCTGCTCTTTTTCAGTCTTTACTTTTCGAAGCATGTGGACGAACGGTTAACCCGGTTAACGGTGCCGTTGGACTACTGTGGACTGGAAACTGGCACGTGTGCCAGGCCGCCGTTGAAACGGTGCTTCGAGGAGGCTCCCTCAGGCCTATGCCGGAGCTACTCGGTCTCGACGCGCCTGTTCCTGTCGCTGTTGACGCCGGCTCCGAGGGGGAAGTCACGTGCGCTGACGCGCGGAAGCTCCGAGATCCGAACCCGAGTCCGAACATAAGGTTCACGAGCTCCCGATCTGGTAAAGATAGTTCCGGCGGGAAACGGAAGCGATCGGAGGAGTTGATGATGACGACGGCGGACCTTAACCTTCGGCTGACGCCGAGTGCCGTGCATAGCGGTTGCCGGCAGGAAATTCGGCGGCCGGGAACGCCGTCGATGAATTCGGAGGAATCGGTGACGACGATGGCGTGCTTGGAGAGCGGACTCGGAGATAACTACGCTCACGGCGGAGACCGGAAAGTCCTCAACCTTTTCATCTGA 711 0.5879 MSCNGCRVLRKGCSESCILRPCLQWIETAEAQGHATVFVAKFFGRAGLMSFISNVPEPQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGSLRPMPELLGLDAPVPVAVDAGSEGEVTCADARKLRDPNPSPNIRFTSSRSGKDSSGGKRKRSEELMMTTADLNLRLTPSAVHSGCRQEIRRPGTPSMNSEESVTTMACLESGLGDNYAHGGDRKVLNLFI 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00771 236 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Arst5g00771 236 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Arst5g00771 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 216 - -
Arst5g00771 236 MobiDBLite consensus disorder prediction 138 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00771 Arst-Chr5 6669201 6670620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00771 1 236 AS2 family AT4G37540 58.964 2.09e-85 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst5g00771 LOB 2.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00771 - - gmx:100816189 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00771 5 6669201 6670620 Arst1g01474 1 18634229 18635502 ECH
Arst5g00771 5 6669201 6670620 Arst5g00771 5 6669201 6670620 ECH
Arst5g00771 5 6669201 6670620 Arst9g03453 9 111386359 111387028 PCT
Arst1g01474 1 18634229 18635502 Arst5g00771 5 6669201 6670620 PCT