Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00769 ATGGCCATAAGGCCCTTCCAATTCCAATCTTCCACCTTCTCCCGCGACACTTTCCTTTCTCTTTTCCGCACTTACCACCATCTTCATCTTCCTTCTTCTTCTTCCTCCTCTTTCCCCACTCTCCCCTCCATTTTCCTCCTCCGCAGCTTCGCCACCTCCGCGCCATCTTCATTCTCTCGCCGCAACCGCTCTCATCCTCCTCCTCCTCCTCCACCACCACCACCTGACACCCTGGCGCAGAAGATTGGAAAGTCCACTCGCCGCCCCGGCGCCACCTCCAAGGCCAGGATTTATGCCGATATCAACGTCGTCCGTCCCAAGGAATATTGGGACTATGAAAATCTCACCGTCCAGTGGGGGGAGCAAGATGACTACGAGGTTGTGAGGAAGGTGGGAAGAGGGAAATACAGTGAGGTCTTCGAGGGCGTTCACTCCACCGATAATGAAAAATGCATCATCAAGATCCTCAAACCCGTCAAGAAGAAAAAGATAAAGAGGGAGATCAAAATATTGCAAAATCTTTGTGGAGGTCCCAATGTTATAAAGCTGCTTGACATTGTTAGGGACCAGCAATCAAAGACCCCAAGCCTTATATTTGAATATGTCAATAACACTGATTTTAAAGTGCTCTACCCCACCCTGTCAGATTATGATATCCGATATTATATCTATGAACTTCTAAAGGCACTGGATTATTGCCACTCTCAAGGAATCATGCATCGGGATGTAAAGCCGCATAATGTAATGATTGATCATGAGCAGCGGAAGCTTCGCCTAATAGATTGGGGGCTTGCAGAGTTTTATCATCCTGGGAAAGAATATAATGTCCGCGTTGCCTCCAGATATTTCAAAGGTCCTGAACTTCTTGTTGATCTTCAGGACTATGATTACTCTCTTGATTTATGGAGTCTTGGTTGTATGTTTGCTGGAATGATTTTTCGTAAGGAGCCATTCTTTTACGGACATGATAACTATGATCAACTAGCCAAAATAGTTAAGGTACTTGGGACTGATGAATTAAATGCGTATCTGAACAAGTACCGCATAGAGTTGGACCCAAATCTAGCAGCACTTGTTGGGAGGTATGCTCGAAAGCCATGGTCAAAGTTTATTAGTGTAGAAAACCAACACTTGGCAGTTCCTGAGGCTATTGACTTTGTTGACAAGTTACTGCGGTATGATCACCAAGATCGACCCACTGCAAAAGAAGCCATGGCCCACCCTTACTTCAATTCAGTTAGAAATGCTGAAAGCAGCAGAACTCATACACATTGA 1275 0.4549 MAIRPFQFQSSTFSRDTFLSLFRTYHHLHLPSSSSSSFPTLPSIFLLRSFATSAPSSFSRRNRSHPPPPPPPPPPDTLAQKIGKSTRRPGATSKARIYADINVVRPKEYWDYENLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHSTDNEKCIIKILKPVKKKKIKREIKILQNLCGGPNVIKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLAKIVKVLGTDELNAYLNKYRIELDPNLAALVGRYARKPWSKFISVENQHLAVPEAIDFVDKLLRYDHQDRPTAKEAMAHPYFNSVRNAESSRTHTH 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00769 424 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Arst5g00769 424 FunFam Casein kinase II subunit alpha 202 413 - -
Arst5g00769 424 Gene3D Transferase(Phosphotransferase) domain 1 202 410 - -
Arst5g00769 424 FunFam Casein kinase II subunit alpha 111 201 - -
Arst5g00769 424 Pfam Protein kinase domain 125 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00769 424 CDD STKc_CK2_alpha 106 410 IPR045216 GO:0004674|GO:0006468
Arst5g00769 424 PANTHER CASEIN KINASE II SUBUNIT ALPHA 89 419 IPR045216 GO:0004674|GO:0006468
Arst5g00769 424 ProSiteProfiles Protein kinase domain profile. 125 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00769 424 SUPERFAMILY Protein kinase-like (PK-like) 99 414 IPR011009 -
Arst5g00769 424 MobiDBLite consensus disorder prediction 56 91 - -
Arst5g00769 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Arst5g00769 424 Gene3D Phosphorylase Kinase; domain 1 125 201 - -
Arst5g00769 424 MobiDBLite consensus disorder prediction 62 78 - -
Arst5g00769 424 SMART serkin_6 125 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00769 Arst-Chr5 6573860 6578089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00769 123 413 Core Cell Cycle Gene Families AT1G76540 30.503 2.63e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Arst5g00769 Pkinase 1.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00769 K03097 - qsa:O6P43_024562 673.315