Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00768 ATGGGTGAGGAGTTTCATCATGGTGTTGTTATGAGAGAGTATGATCCTAATAGAGACAGAGAAAGAGTAGAAGAAGTAGAGAGAATATGTGAGGTTGGTCCCAGTGGAAAGCTCTGTATCTTCACCGACCTCCTTGGTGACCCAATCTGCAGGGTCCGCCACTCACCTTCTTTCCTCATGCTGGTGGCGGAGATTGGAGATGAGATAGTGGGAATGATAAGGGGTTGCATCAAAACCATCACGTGCGGAAAGAAGCTCTCCAGAAACACCAAACACAGCAACACTAGTAACACTGGTAACAGTAACAGACATCTCCTTGTTTATGCTAAAGTCGCCTACATATTAGGCCTTCGCGTTTCTCCCTCTCACCGGAGAATGGGAATAGGGTTGAAGCTGGTGCATCGAATGGAGGCATGGTTCAGAGATAATGGCGCGGAGTATTCCTACATGGCAACGGAAAACGACAATTTAGCATCCGTGAAACTCTTCACTGACAAATGCGGTTACACAAAGTTCCGTACTCCTTCCATCCTTGTCAACCCCGTTTTCGCCCACCGTCTCACACTCTCCCCAAAGGTCAAAATCATCCACCTCACCCCCTCCCAAGCGGAAACCATCTACCGCCGCCGATTCGCCACCACCGAGTTCTTTCCCCGTGACATCGACGCCGTCCTCAACAACAAACTCTCCATCGGGACCTTCCTCGCCGTTCCCGACAGCGCCACCTGGCAAGGCACGGATCACTTCCTATCCGACCCACCCAAGTCGTGGGCCATACTTAGCATATGGAACTCTAAGGAACTCTTCACGCTCCAAGTGCGTGGTGCGTCGCGCGTGAAACGCACGCTTGCAAAGACGACTCGCGTGGTTGACAAGGCTTTACCCTTTTTACGGTTACCGTCATTTCCGGACTTCTTCAGGCCGTTCGGGTTTCACTTTATGTATGGAATTGGAGGGGAAGGTCCCGAGGCGGTTAAGATGGTTAAGTCTTTGTGCGATTTTGCGCACAACGTGGCCAAAGAACGTGATTGCGGCGCGGTAGTTACCGAAGTGTCTGGTCAAGAACCGTTGCGGTTTGGGATACCGCACTGGAAGATGCTATCGTGCCCCGAAGATTTATGGTGCATTAAGAGGCTGGGTGAGGATTACAGCGACGGTTCAGTTGGTGACTGGACCAAATCTCCACCTGGAATTTCTATTTTTGTTGACCCAAGAGAAGTCTGA 1224 0.5082 MGEEFHHGVVMREYDPNRDRERVEEVERICEVGPSGKLCIFTDLLGDPICRVRHSPSFLMLVAEIGDEIVGMIRGCIKTITCGKKLSRNTKHSNTSNTGNSNRHLLVYAKVAYILGLRVSPSHRRMGIGLKLVHRMEAWFRDNGAEYSYMATENDNLASVKLFTDKCGYTKFRTPSILVNPVFAHRLTLSPKVKIIHLTPSQAETIYRRRFATTEFFPRDIDAVLNNKLSIGTFLAVPDSATWQGTDHFLSDPPKSWAILSIWNSKELFTLQVRGASRVKRTLAKTTRVVDKALPFLRLPSFPDFFRPFGFHFMYGIGGEGPEAVKMVKSLCDFAHNVAKERDCGAVVTEVSGQEPLRFGIPHWKMLSCPEDLWCIKRLGEDYSDGSVGDWTKSPPGISIFVDPREV 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00768 407 CDD NAT_SF 60 147 - -
Arst5g00768 407 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 407 - -
Arst5g00768 407 FunFam Probable N-acetyltransferase HLS1-like 18 176 - -
Arst5g00768 407 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 190 IPR000182 GO:0016747
Arst5g00768 407 Pfam Acetyltransferase (GNAT) family 54 169 IPR000182 GO:0016747
Arst5g00768 407 Gene3D - 45 175 - -
Arst5g00768 407 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 50 173 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00768 Arst-Chr5 6540154 6542724 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Arst5g00768 Acetyltransf_1 2.8e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00768 - - gmx:100800613 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00768 5 6540154 6542724 Arst5g00768 5 6540154 6542724 ECH
Arst5g00768 5 6540154 6542724 Arst1g01480 1 18980849 18982959 PCT