Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00755 ATGGCTAGTGTGGACCACAATTGTTGTAATTCTCTCCAAGATGACAACAAATTCACTCCTGCACCGCCACTGCCACCACCACCACCATCTCCTCGGCCCCGTTCAGCAGCAACTAGTTGTTGTCCTTGCAGGCGCCTTGTGGCGAATTATAATTCAGCGATGAGAGAGTGCAGCTATGTATCTCCAGCAACAATAGAATTGTGGGATCGTCTTTTTGATTCAGGATTTAAAGCAGATGTTAGGATTAATACTGGTAACGGCGGCATTATTTACGCTCATTATAACATAGTTGCAGTGGCATCCCCCGTATTAAGAGGCTTGCTGAAGCAAGGAATTTTTTTTCGGAGGTGGAGATCAATCACAATCAAAGGGGTACCACATGATGCTGTTCGGGTTTTCTTTCGATATTTGTACACTTCGTGTTATGAGAAGGAAGAGATGGAAGCATATGTACTACATTTGTTAGTGCTGTCACATGTATTCATGGTTCCTCATTTGAAGCGGGAATGTGAGCAGAATCTAGAATCGAGTTTCCTCACAATAGACAATGTAATTGATGTATTTCAGATTTCATTACTGTGTGATGCTCCACGGCTTAGCCTCATCTGTCACCGTATGATACTTAGCAACTTCAAAGCAGTTTCAGAGTCTGAAGGATGGAAAGCGATGAAGGAGAGCCATCCAGTTTTAGAAAAGGAAGTTTTGGAGTCCATGATCGAGGAAGAAAATAATAAAAAGGAGAGGACCCGAAAGATCAATGAGAGGAAGATATACATGCAACTGTATGAGGCGATGGAAGCTCTTGTTCACATATGCAGAGATGGCTGCCGAACTATTGGCCCTTGTGATAAAGACTTCAAAGCAAATCAGCCATGTAAATATGCAGCATGTAAGGGGCTAGAATTGCTCGTGCGACATTTTGCTGCATGCAAACTTAGAGTCCCTGGAGGTTGTGGTCATTGCAAGAGGATGTGGCAACTATTAGAGCTGCATTCCCGAATATGTTCTGATCCCGATGGTTGTAGAGTTCCCTTGTGCAGGAACTTTAAGCAGCGGATATCGAAACAAAGCAAGAAAGAGGAAATCAGGTGGAAAATATTGGTTAAAAAGATCTTGAGAACAAGAGGTATTGGAATAGCACCATGCTTTCAGCAGCAATAA 1161 0.4289 MASVDHNCCNSLQDDNKFTPAPPLPPPPPSPRPRSAATSCCPCRRLVANYNSAMRECSYVSPATIELWDRLFDSGFKADVRINTGNGGIIYAHYNIVAVASPVLRGLLKQGIFFRRWRSITIKGVPHDAVRVFFRYLYTSCYEKEEMEAYVLHLLVLSHVFMVPHLKRECEQNLESSFLTIDNVIDVFQISLLCDAPRLSLICHRMILSNFKAVSESEGWKAMKESHPVLEKEVLESMIEEENNKKERTRKINERKIYMQLYEAMEALVHICRDGCRTIGPCDKDFKANQPCKYAACKGLELLVRHFAACKLRVPGGCGHCKRMWQLLELHSRICSDPDGCRVPLCRNFKQRISKQSKKEEIRWKILVKKILRTRGIGIAPCFQQQ 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00755 386 SUPERFAMILY POZ domain 59 175 IPR011333 -
Arst5g00755 386 Gene3D - 179 252 - -
Arst5g00755 386 FunFam BTB/POZ and TAZ domain-containing protein 2 252 376 - -
Arst5g00755 386 ProSiteProfiles BTB domain profile. 78 146 IPR000210 GO:0005515
Arst5g00755 386 FunFam BTB/POZ and TAZ domain-containing protein 2 180 250 - -
Arst5g00755 386 Pfam TAZ zinc finger 262 346 IPR000197 -
Arst5g00755 386 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 48 380 IPR044513 -
Arst5g00755 386 Gene3D Potassium Channel Kv1.1; Chain A 51 178 IPR011333 -
Arst5g00755 386 MobiDBLite consensus disorder prediction 19 33 - -
Arst5g00755 386 Coils Coil 232 252 - -
Arst5g00755 386 SMART TAZ_2 255 347 IPR000197 -
Arst5g00755 386 Gene3D TAZ domain 253 376 IPR035898 -
Arst5g00755 386 SMART BTB_4 78 178 IPR000210 GO:0005515
Arst5g00755 386 Pfam BTB/POZ domain 70 176 IPR000210 GO:0005515
Arst5g00755 386 MobiDBLite consensus disorder prediction 12 33 - -
Arst5g00755 386 ProSiteProfiles Zinc finger TAZ-type profile. 251 349 IPR000197 -
Arst5g00755 386 SUPERFAMILY TAZ domain 255 355 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00755 Arst-Chr5 6481578 6484678 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Arst5g00755 BTB 7.3e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00755 - - lja:Lj2g3v1968190.1 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00755 5 6481578 6484678 Arst5g00755 5 6481578 6484678 ECH