Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00754 ATGGGGAGCTCTCTCACTGCCACCTCTTTTTCTTTGTCAAGTCTAATGTGTGAAGAAGAAGGTGAAGCTTGCTTCTTTGAAGACAACTATGATGATGAAAATGAACACACTGGGATTGTTTTTCATGAGGAAGATGAAGAGGAATACATTGAGTATTTGTTCAGCCAAGAAACTGCTTTTGGATTCCACAATCATGATGATTGCTCCGCCGCCAGATTCTGGTTGAGGACTGCTCGTTTTGATGCCATTGATTGGATTTTCAATACACAGGCCAAACTTGGATTCAAAGTTCACACAGCTTATTTATCAGTCTCCTACTTTGATCGGTTTCTTTCAAAACGATCCATTGATGAATCAAAACCTTGGGCTATTCAATTATTATCGGTGGCATGCTTATCTCTTGCAGCAAAAATGGAAGAGCAAAATGTGCCTCCACTCTCTGAATATTCAATAGTTGAATACAGATTTGAGAGCAAAGTGATTAAGAACATGGAGCTTCTGATTCTTGCTACCTTGGATTGGAAAATGGGATCATCATCACCAACTCCTTTTTCTTATCTCCATTACTTTCTCACAAAGTTCTGCCCTGGATCCAATTCACACACAATCATCACAAAAGCCACCCAACACATTGTAGCCATGGTCAAAGATGTTAATTTGATGGATCAACGGCCATCTATAATAGCCTCCGCTGCAATATTAGCAGCAGTTGATGCTACATTAACAAGAAAGACCATGGATCTTAGGATAAGAAAAATCTCATCTTGGGGCAATCTAGAAAGTGGAGATGTATTTTCCTGTTATAATCTTATACAGGAGAAGAGGAGGAACAAAGTTAAGACCCCTTGCTCGAATTTAATGTCAAACCAATCGAACTCCACGTGTGTTCTTGAGAATCAATCTGACACCGCTTGTTCCGGAGTTAAGAGAAAACTTTCTTTTCAGGACACTGAGGAAACAGAAAACTACAAGAAGCTACATCGTCACTAG 990 0.397 MGSSLTATSFSLSSLMCEEEGEACFFEDNYDDENEHTGIVFHEEDEEEYIEYLFSQETAFGFHNHDDCSAARFWLRTARFDAIDWIFNTQAKLGFKVHTAYLSVSYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQNVPPLSEYSIVEYRFESKVIKNMELLILATLDWKMGSSSPTPFSYLHYFLTKFCPGSNSHTIITKATQHIVAMVKDVNLMDQRPSIIASAAILAAVDATLTRKTMDLRIRKISSWGNLESGDVFSCYNLIQEKRRNKVKTPCSNLMSNQSNSTCVLENQSDTACSGVKRKLSFQDTEETENYKKLHRH 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00754 329 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Arst5g00754 329 SMART cyclin_7 84 170 IPR013763 -
Arst5g00754 329 CDD CYCLIN_AtCycD-like_rpt1 78 174 - -
Arst5g00754 329 Gene3D - 77 179 - -
Arst5g00754 329 Pfam Cyclin, C-terminal domain 181 288 IPR004367 -
Arst5g00754 329 PANTHER CYCLINS 43 281 IPR039361 -
Arst5g00754 329 SMART Cyclin_C_2 181 315 IPR004367 -
Arst5g00754 329 Gene3D - 180 267 - -
Arst5g00754 329 FunFam Cyclin-D5-1 74 177 - -
Arst5g00754 329 SUPERFAMILY Cyclin-like 39 176 IPR036915 -
Arst5g00754 329 Pfam Cyclin, N-terminal domain 51 176 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00754 Arst-Chr5 6454764 6457068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00754 77 282 Core Cell Cycle Gene Families AT1G70210 39.151 2.32e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00754 K18811 - gmx:100798140 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00754 5 6454764 6457068 Arst5g00754 5 6454764 6457068 ECH