Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00742 ATGGGGAAGAAGCAGCATAGCAAGGATAGGATGTTCATCACCAAAACGGAGTGGGCCACCGAATGGGGTGGTGCCAAATCCAAAGAGAATCGCACCTCCTTCAAACGCCTTCCTTTCTATTGCTGCGCGCTTACATTTACTCCGTTTGAATATCCGGTGTGCACAGCTGATGGGAGTGTTTTCGATGTTATGAACATCACCCCGTATATTGTTAAATATGGGAAACACCCCGTCACTGGAGCTCCCCTCAAGCAGGAAGATCTCATTCCACTAACTTTCCACAAGAATTCTGAAGGAGAATATCAATGTCCTGTGCTAAACAAAGTTTTCACTGAATTTACACATATTGTCGCAGTGAAGACTACAGGAAATGTGTTTTGCTATGAGGCTGTTAAAGAATTAAACATCAAAACGAAAAACTGGAAAGAGCTGCTCACTGATGAGCCATTCACGAAGGATGATCTTATAACTATTCAGAATCCTAATGCACTTGACAAGAAAGTTCTGCTGGATTTTGATCATGTCAAAAATAGTTTGAAAATTGACGACGAAGAAATACAGAAAATGAGATCAGATCCAACCTATAACATAAATGTGTCGGGGGATATCAAGCAAATGCTTCTAGAGCTTGGAACTGAGAAAGGAAAGGAAACTGCAATGCATGGGGGTGGTGGTGGCAAGGCACAACAAGAAAGAGCTGCTGCACTTGCTGCCATCTTAGCTGCAAGATCCCGTGTTAAAGAAGATTCCAAATCAGATCAAAATGGAGAGACTAAAGCTCCCCAGGCTTTTAGTATTGTAGATGCTGCATCTGCTGCTGTACATGGAAGAAGTGCAGCTGCTGCTAAAGCCTCTTCTAGTGATAAAACAGCTGCTAGAATAGCTATGCACATGGCTGGTGATAGGGAGGCAGTGAATGCAAAGCTGGTGAAAAGCCGTTACACTACTGGAGCTGCTTCCCGGTCATTCACTTCAACATCATTTGATCCGGTTACCAAAAATGACTTTGAATATGTGAAAGTTGAGAAGAATCCAAAGAAGAAAGGATATGTACAACTGCATACAACACACGGTGATTTGAACATTGAGCTGCACTGTGATATAACACCAAGGACATGTGAGAACTTTATCACTCTTTGTGAACGTGGATATTACAATGGAGTTGCTTTTCATCGGAACATTCGGAATTTTATGATACAAGGCGGTGATCCTACTGGTACTGGAAAAGGTGGTGAATCAATATGGGGACAGCCTTTTAAAGACGAGCTTAACTCTAAATTAGTTCATTCTGGAAGAGGTGTGGTTAGCATGGCAAATAGTGGTCCACACACGAATGGTTCCCAGTTTTTCATCTTGTACAAGTCCGCAAAACATTTAAACTTTAAACACACAGTATTTGGAGCAGTAGTTGGTGGCTTGACTACATTAGCAGCAATGGAAAAGGTTCCCGTTGATGATAATGATCGGCCCCTGGAAGAAATCAAGATAACAAGTGTCACAATTTTTGTGAATCCTTATACAGAACCAGATGAGGAAGATGAGCAGGATAAAGAAAAAGAGAAGATCGAGGATGAAGATAATAGTAAGGTGGGATCATGGTATAGCAATCCTGGAGCTGGAACATTAGAATCTGGAGGTACGGTTGGTGGCGGTGTTGGCAAGTACTTGAAAGCCAGAACTGCTCAACAGCCCGAGTCAACAACCAGTACAGCCGTTGTAGGCAAGAAAAGAAAAGCCGGAGCTGCCACTGGTGAATTTAAAGATTTTTCTGCATGGTAA 1779 0.4238 MGKKQHSKDRMFITKTEWATEWGGAKSKENRTSFKRLPFYCCALTFTPFEYPVCTADGSVFDVMNITPYIVKYGKHPVTGAPLKQEDLIPLTFHKNSEGEYQCPVLNKVFTEFTHIVAVKTTGNVFCYEAVKELNIKTKNWKELLTDEPFTKDDLITIQNPNALDKKVLLDFDHVKNSLKIDDEEIQKMRSDPTYNINVSGDIKQMLLELGTEKGKETAMHGGGGGKAQQERAAALAAILAARSRVKEDSKSDQNGETKAPQAFSIVDAASAAVHGRSAAAAKASSSDKTAARIAMHMAGDREAVNAKLVKSRYTTGAASRSFTSTSFDPVTKNDFEYVKVEKNPKKKGYVQLHTTHGDLNIELHCDITPRTCENFITLCERGYYNGVAFHRNIRNFMIQGGDPTGTGKGGESIWGQPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAKHLNFKHTVFGAVVGGLTTLAAMEKVPVDDNDRPLEEIKITSVTIFVNPYTEPDEEDEQDKEKEKIEDEDNSKVGSWYSNPGAGTLESGGTVGGGVGKYLKARTAQQPESTTSTAVVGKKRKAGAATGEFKDFSAW 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00742 592 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 390 402 IPR002130 GO:0000413|GO:0003755
Arst5g00742 592 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 433 448 IPR002130 GO:0000413|GO:0003755
Arst5g00742 592 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 461 476 IPR002130 GO:0000413|GO:0003755
Arst5g00742 592 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 364 379 IPR002130 GO:0000413|GO:0003755
Arst5g00742 592 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 448 460 IPR002130 GO:0000413|GO:0003755
Arst5g00742 592 FunFam Peptidyl-prolyl cis-trans isomerase cyp65 331 515 - -
Arst5g00742 592 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 350 500 IPR002130 GO:0000413|GO:0003755
Arst5g00742 592 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 385 402 IPR020892 GO:0003755|GO:0006457
Arst5g00742 592 SUPERFAMILY Cyclophilin-like 350 511 IPR029000 -
Arst5g00742 592 CDD cyclophilin_RING 350 507 - -
Arst5g00742 592 ProSiteProfiles U-box domain profile. 35 108 IPR003613 GO:0004842|GO:0016567
Arst5g00742 592 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 354 501 IPR002130 GO:0000413|GO:0003755
Arst5g00742 592 SMART Ubox_2 39 101 IPR003613 GO:0004842|GO:0016567
Arst5g00742 592 FunFam Peptidyl-prolyl cis-trans isomerase 2 41 96 - -
Arst5g00742 592 CDD RING-Ubox_PPIL2 38 110 IPR026951 -
Arst5g00742 592 Gene3D - 331 515 IPR029000 -
Arst5g00742 592 MobiDBLite consensus disorder prediction 505 592 - -
Arst5g00742 592 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 344 515 IPR044666 -
Arst5g00742 592 SUPERFAMILY RING/U-box 38 104 - -
Arst5g00742 592 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 96 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00742 Arst-Chr5 6373503 6379321 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00742 1 592 U-box Gene Family AT5G67530 76.412 0.0 913
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00742 K10598 - gmx:100819923 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00742 5 6373503 6379321 Arst5g00742 5 6373503 6379321 ECH