Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00717 ATGGCATTGACTACACCAGAAGAGGAAAAACAACACAATAACAATAATGGGTGCCACATGAACCTCGCTATTTCCCAATACTGCACCGGGGAACCACAAGCAAATTTGAGTGCTGTCATTAATCACTATGTCCACACTCTAAATCACTTCAACTTTCGCAACTTGGGGTACCCCACGAATCAGAATTTCGACTACGATGCATTGGCACCATTGCTACAATTTCACCTAAACAATGCAGGTGATCCATTTGTTGGGAGCAGCTTCCGTCTAAATTCAACATCATTTGAAGTTAGTGTTCTTGATTGGTTCGCTAATTTGTGGGACATACAAAAGAATAAGTATTGGGGATACGTCACTACTGGTGGAACTGAGGCCAATCTTCACGCCATTTTAGTAGGGAGAGAACAATTTCCTGATGGAGTTCTATATACTTCAGAAGATTCACATTATTCAATATTTAAAATTGCAAGAATATATCGAATGCAATGTGTTGTAGTTAAAACTCTTTTCTCCGGTGAGATTGACTGTGCTGATCTAAAAGCTACATTACTTCATCACAAGGACAGGCCAGCCATCATCAATCTTAACATAGGTACAACGATGAAAGGAGCTGTTGATGACATCGATCTTGTAATAAAAACACTTGAAAAAAGTGGTTTCAGTCGTGATAGATTCTACATTCACTGTGATGCAGCTTTATTTGGAATCATGCTCCCTTTTCTCAAAGCAGCACCAAAGATAATAAGTTTCAAGAAACCCATTGGAAGTGTGAGTGTTTCGGGGCATAAATTCTTGGGATGTCCAATTCCCTGTGGAGTTGTAATAACCCGTTCAGAATACATGAATGCGTCATCAAGGGATGTTGAAATCATTGGTTCAAGAGATACAACAATCACAGGTAGTCGATGTGGACATGCTCCAATCTTCCTTTGGTATGCAATCAAAAAGAAAGGCTCAATAGGGATTCAAAACGAAGTGGAAAATTGCATAGCCAATGCACGTTACTTGCACAATCGACTAAGTGATGCTGGAATTGGTGCAATGTTAAATGAGCATAGCAACATTGTTGTGTTTGAGAGGCCTCTTGATCATGAATTTAGCAGTAGGTGGAACTTGGCGTGCCAAGGGAACATTGCACACGTGGTGGTCATGCAGCATGTTACCATTCAAATGTTGGATTCTTTTGTTACTGAGTTTCTTCATAAACGATCCTTTTCACGGTTTCAGGATTATGGCTCTTTTCAGCCTCTATGTATAGCAGAAAAAGTTAGCATTGCAAATTGTTCTTGCTCAATGCACAACTTATATCATGATTGTGCATGCTAG 1326 0.3974 MALTTPEEEKQHNNNNGCHMNLAISQYCTGEPQANLSAVINHYVHTLNHFNFRNLGYPTNQNFDYDALAPLLQFHLNNAGDPFVGSSFRLNSTSFEVSVLDWFANLWDIQKNKYWGYVTTGGTEANLHAILVGREQFPDGVLYTSEDSHYSIFKIARIYRMQCVVVKTLFSGEIDCADLKATLLHHKDRPAIINLNIGTTMKGAVDDIDLVIKTLEKSGFSRDRFYIHCDAALFGIMLPFLKAAPKIISFKKPIGSVSVSGHKFLGCPIPCGVVITRSEYMNASSRDVEIIGSRDTTITGSRCGHAPIFLWYAIKKKGSIGIQNEVENCIANARYLHNRLSDAGIGAMLNEHSNIVVFERPLDHEFSSRWNLACQGNIAHVVVMQHVTIQMLDSFVTEFLHKRSFSRFQDYGSFQPLCIAEKVSIANCSCSMHNLYHDCAC 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00717 441 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 256 277 IPR021115 GO:0016831
Arst5g00717 441 PANTHER - 12 434 - -
Arst5g00717 441 Gene3D Aspartate Aminotransferase, domain 1 315 403 IPR015422 GO:0003824
Arst5g00717 441 SUPERFAMILY PLP-dependent transferases 41 399 IPR015424 -
Arst5g00717 441 Gene3D - 71 314 IPR015421 GO:0003824
Arst5g00717 441 Pfam Pyridoxal-dependent decarboxylase conserved domain 92 351 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00717 Arst-Chr5 6244990 6247006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00717 197 435 Calmodulin-binding Proteins AT1G65960 25.954 4.75e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00717 K25193 - gmx:100781665 647.506