Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00706 ATGAATCATGCCTCAACTCAAATCATGAAGACCCTCCTAGATGCTGACACCATTGTTAACTTGAACAATCAAAATAATATACTAGGTGTTCCTTCACACCCTTCTTCTTCTGCTGCTGTAGAAGCAGTTCTACCACCAAGCTTTTGCTGTTACTATGGAGTTGAAGGTGAAAATGTTGGATGGTATCCACCACTCCCTGTCTTGCCCCTTAAATCCGATGGCTCTCTCTTTGACATAGAAGCTCTCAGCAGAACAAAACAACAAGCGCCAAAACTGGAGGATTTCTTTGGTGGGCAAAGCCAAACAACGGTGACTCCTGAATGCAACAACGCCAGAGAAGCACTGCCTCTGAACTATAACATGTTTCACAATCCAAATTATCTAAATCATGTACAAGAGAATATCAACTTGCTTCATGATGTTAACCAGCAACACTCATATTATTCTTCTGCATCAAGAAACAACAACAACCATCATCAGGTGATGCTACAAGGATACAATATGGCTAAGGAGGAAGTGCCTGGTATCCACCATGCAATGGAGGCAAAACTGGTTGTTCCTTTGGACGATAATAGAGGTGAATCGCTGTCCATTGGATCGGTGGCGTTCGGGGATTTACAGTCACTGAGGTTGTCCATGAGTCCAAGCTCCCAATCAAGTTGTGTCACAACCTCACAACAAGCATCACATGCTGTCATGAGCACTTCAAAGAAGAGGGTGCATGATGAAATGGTGGAGCAGAACCAGAAGCAAATTGCTCATAGAAAATCCATTGATACCTTTGGTCAGAGAACATCTCAATATAGAGGTGTTACAAGGCATAGGTGGACTGGTAGATATGAAGCTCATCTATGGGACAATAGTTGCAAGAAAGAGGGTCAGAGTAGGAAAGGAAGGCAAGGGGGTTATGATATGGAAGAAAAAGCAGCGAGAGCTTATGATTTGGCTGCACTCAAGTATTGGGGACCCTCCACTCATACAAACTTCCCATTGGAAAATTATCAAAATGAGCTTGTGCAAATGAAGAACATGACTAGGCAGGAATATGTTGCTCATTTACGAAGAAAAAGCAGCGGATTCTCAAGAGGGGCTTCAATCTACAGAGGAGTAACAAGACACCATCAGCATGGAAGGTGGCAAGCCCGAATTGGAAGAGTGGCTGGAAACAAAGATCTATATCTTGGGACATTCAGTACCCAAGAGGAAGCTGCTGAAGCATACGACATTGCTGCTATAAAATTCCGAGGAGTTAATGCAGTAACTAACTTTGAAATAATCAGATACGATGTGGAAAAAATTATGGCAAGCAATGACCTTCTTAGCATTGAACAAGCTAGGAGAAAAAGAGAGGTCATTGTTAATAATAACCATAAACCATCTACTATTGAAGAATCGATTCTAATGCACAAGAGCTGCAAAAACCCTCAGATCATGATGATTAATCATCCACCAACAATGGCATTAGAGGAGGAATCAAGTAGTAAGACTGGAACACATATTTCAAATGAAGATAAGACAGGTTTGCCAATTCTCTATGGAAGACCTTCAACAACAGCAGCCTCTACTAGATTACTGGCTACCATTCCAACCGGTTGGGACCAACCACCATCACATCTGAGACCTAATAAGCTTTCCTTGCCTCAGATGCCAGTTTTTGCTGCATGGACAGACGCATAA 1677 0.4228 MNHASTQIMKTLLDADTIVNLNNQNNILGVPSHPSSSAAVEAVLPPSFCCYYGVEGENVGWYPPLPVLPLKSDGSLFDIEALSRTKQQAPKLEDFFGGQSQTTVTPECNNAREALPLNYNMFHNPNYLNHVQENINLLHDVNQQHSYYSSASRNNNNHHQVMLQGYNMAKEEVPGIHHAMEAKLVVPLDDNRGESLSIGSVAFGDLQSLRLSMSPSSQSSCVTTSQQASHAVMSTSKKRVHDEMVEQNQKQIAHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEEKAARAYDLAALKYWGPSTHTNFPLENYQNELVQMKNMTRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFEIIRYDVEKIMASNDLLSIEQARRKREVIVNNNHKPSTIEESILMHKSCKNPQIMMINHPPTMALEEESSSKTGTHISNEDKTGLPILYGRPSTTAASTRLLATIPTGWDQPPSHLRPNKLSLPQMPVFAAWTDA 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00706 558 Pfam AP2 domain 366 416 IPR001471 GO:0003700|GO:0006355
Arst5g00706 558 Pfam AP2 domain 267 322 IPR001471 GO:0003700|GO:0006355
Arst5g00706 558 SUPERFAMILY DNA-binding domain 365 424 IPR016177 GO:0003677
Arst5g00706 558 SMART rav1_2 267 336 IPR001471 GO:0003700|GO:0006355
Arst5g00706 558 SMART rav1_2 366 430 IPR001471 GO:0003700|GO:0006355
Arst5g00706 558 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 86 460 - -
Arst5g00706 558 CDD AP2 266 330 IPR001471 GO:0003700|GO:0006355
Arst5g00706 558 Gene3D AP2/ERF domain 266 332 IPR036955 GO:0003700|GO:0006355
Arst5g00706 558 Gene3D AP2/ERF domain 366 426 IPR036955 GO:0003700|GO:0006355
Arst5g00706 558 CDD AP2 365 425 IPR001471 GO:0003700|GO:0006355
Arst5g00706 558 FunFam AP2-like ethylene-responsive transcription factor ANT 266 332 - -
Arst5g00706 558 ProSiteProfiles AP2/ERF domain profile. 267 330 IPR001471 GO:0003700|GO:0006355
Arst5g00706 558 SUPERFAMILY DNA-binding domain 266 332 IPR016177 GO:0003677
Arst5g00706 558 FunFam AP2-like ethylene-responsive transcription factor 365 426 - -
Arst5g00706 558 PRINTS Ethylene responsive element binding protein signature 268 279 IPR001471 GO:0003700|GO:0006355
Arst5g00706 558 PRINTS Ethylene responsive element binding protein signature 406 426 IPR001471 GO:0003700|GO:0006355
Arst5g00706 558 ProSiteProfiles AP2/ERF domain profile. 366 424 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00706 Arst-Chr5 6117101 6120381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00706 48 558 AP2-EREBP Transcription Factor Family AT4G37750 49.372 7.80e-156 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Arst5g00706 AP2 3.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00706 K09285 - gmx:100792451 561.607