Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00704 ATGAATCATGCCTCAACTCAAATCATGAAGACCCTCCTAGATGCTGACACCATTGTTAACTTGAACAATCAAAATAATATACTAGGTGTTCCTTCACACCCTTCTTCTTCTGCTGCTGTAGAAGCAGTTCTACCACCAAGCTTTTGCTGTTACTATGGAGTTGAAGGTGAAAATGTTGGATGGTATCCACCACTCCCTGTCTTGCCCCTTAAATCCGATGGCTCTCTCTTTGACATAGAAGCTCTCAGCAGAACAAAACAACAAGCGCCAAAACTGGAGGATTTCTTTGGTGGGCAAAGCCAAACAACGGTGACTCCTGAATGCAACAACGCCAGAGAAGCACTGCCTCTGAACTATAACATGTTTCACAATCCAAATTATCTAAATCATGTACAAGAGAATATCAACTTGCTTCATGATGTTAACCAGCAACACTCATATTATTCTTCTGCATCAAGAAACAACAACAACCATCATCAGGTGATGCTACAAGGATACAATATGGCTAAGGAGGAAGTGCCTGGTATCCACCATGCAATGGAGGCAAAACTGGTTGTTCCTTTGGACGATAATAGAGGTGAATCGCTGTCCATTGGATCGGTGGCGTTCGGGGATTTACAGTCACTGAGGTTGTCCATGAGTCCAAGCTCCCAATCAAGTTGTGTCACAACCTCACAACAAGCATCACATGCTGTCATGAGCACTTCAAAGAAGAGGGTGCATGATGAAATGGTGGAGCAGAACCAGAAGCAAATTGCTCATAGAAAATCCATTGATACCTTTGGTCAGAGAACATCTCAATATAGAGGTGTTACAAGGCATAGGTGGACTGGTAGATATGAAGCTCATCTATGGGACAATAGTTGCAAGAAAGAGGGTCAGAGTAGGAAAGGAAGGCAAGGGGGTTATGATATGGAAGAAAAAGCAGCGAGAGCTTATGATTTGGCTGCACTCAAGTATTGGGGACCCTCCACTCATACAAACTTCCCATTGGAAAATTATCAAAATGAGCTTGTGCAAATGAAGAACATGACTAGGCAGGAATATGTTGCTCATTTACGAAGAAAAAGCAGCGGATTCTCAAGAGGGGCTTCAATCTACAGAGGAGTAACAAGCAGACACCATCAGCATGGAAGGTGGCAAGCCCGAATTGGAAGAGTGGCTGGAAACAAAGATCTATATCTTGGGACATTCAGTACCCAAGAGGAAGCTGCTGAAGCATACGACATTGCTGCTATAAAATTCCGAGGAGTTAATGCAGTAACTAACTTTGAAATAATCAGATACGATGTGGAAAAAATTATGGCAAGCAATGACCTTCTTAGCATTGAACAAGCTAGGAGAAAAAGAGAGGTCATTGTTAATAATAACCATAAACCATCTACTATTGAAGAATCGATTCTAATGCACAAGAGCTGCAAAAACCCTCAGATCATGATGATTAATCATCCACCAACAATGGCATTAGAGGAGGAATCAAGTAGTAAGACTGGAACACATATTTCAAATGAAGATAAGACAGGTTTGCCAATTCTCTATGGAAGACCTTCAACAACAGCAGCCTCTACTAGATTACTGGCTACCATTCCAACCGGTTGGGACCAACCACCATCACATCTGAGACCTAATAAGCTTTCCTTGCCTCAGATGCCAGTTTTTGCTGCATGGACAGACGCATAA 1680 0.4232 MNHASTQIMKTLLDADTIVNLNNQNNILGVPSHPSSSAAVEAVLPPSFCCYYGVEGENVGWYPPLPVLPLKSDGSLFDIEALSRTKQQAPKLEDFFGGQSQTTVTPECNNAREALPLNYNMFHNPNYLNHVQENINLLHDVNQQHSYYSSASRNNNNHHQVMLQGYNMAKEEVPGIHHAMEAKLVVPLDDNRGESLSIGSVAFGDLQSLRLSMSPSSQSSCVTTSQQASHAVMSTSKKRVHDEMVEQNQKQIAHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEEKAARAYDLAALKYWGPSTHTNFPLENYQNELVQMKNMTRQEYVAHLRRKSSGFSRGASIYRGVTSRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFEIIRYDVEKIMASNDLLSIEQARRKREVIVNNNHKPSTIEESILMHKSCKNPQIMMINHPPTMALEEESSSKTGTHISNEDKTGLPILYGRPSTTAASTRLLATIPTGWDQPPSHLRPNKLSLPQMPVFAAWTDA 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00704 559 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 86 461 - -
Arst5g00704 559 Pfam AP2 domain 367 417 IPR001471 GO:0003700|GO:0006355
Arst5g00704 559 Pfam AP2 domain 267 322 IPR001471 GO:0003700|GO:0006355
Arst5g00704 559 CDD AP2 365 426 IPR001471 GO:0003700|GO:0006355
Arst5g00704 559 SUPERFAMILY DNA-binding domain 365 425 IPR016177 GO:0003677
Arst5g00704 559 ProSiteProfiles AP2/ERF domain profile. 366 425 IPR001471 GO:0003700|GO:0006355
Arst5g00704 559 Gene3D AP2/ERF domain 266 332 IPR036955 GO:0003700|GO:0006355
Arst5g00704 559 Gene3D AP2/ERF domain 366 427 IPR036955 GO:0003700|GO:0006355
Arst5g00704 559 CDD AP2 266 330 IPR001471 GO:0003700|GO:0006355
Arst5g00704 559 FunFam AP2-like ethylene-responsive transcription factor 365 427 - -
Arst5g00704 559 SMART rav1_2 366 431 IPR001471 GO:0003700|GO:0006355
Arst5g00704 559 SMART rav1_2 267 336 IPR001471 GO:0003700|GO:0006355
Arst5g00704 559 FunFam AP2-like ethylene-responsive transcription factor ANT 266 332 - -
Arst5g00704 559 ProSiteProfiles AP2/ERF domain profile. 267 330 IPR001471 GO:0003700|GO:0006355
Arst5g00704 559 SUPERFAMILY DNA-binding domain 266 332 IPR016177 GO:0003677
Arst5g00704 559 PRINTS Ethylene responsive element binding protein signature 268 279 IPR001471 GO:0003700|GO:0006355
Arst5g00704 559 PRINTS Ethylene responsive element binding protein signature 407 427 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00704 Arst-Chr5 6117100 6120382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00704 48 559 AP2-EREBP Transcription Factor Family AT4G37750 49.283 4.41e-154 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Arst5g00704 AP2 3.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00704 K09285 - gmx:100792451 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00704 5 6117100 6120382 Arst1g01550 1 21327205 21332558 PCT