Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00669 ATGATTTCCACCGAGGAATCATGGACTACTTGGCTCTGTGATTTGGAAGAAGAGGACTACAGTTTCATCAATGGCATAATAGCAGCCCCTAATAATTACTCAAACTCACAGATGAGTAACAATGATAATGAGAGGCCATCCAAGCTTCTCAAGAGCACCACCCCAACCCCAAGACGCAGAAGAACTACTGGCTCAGCTGGCACTGGCAGATCCCCCCAACACGCCCATGATCACATCATTGCCGAAAGAATGAGAAGGGAAAAGATTAGCCAACAGTTCATAGCACTTTCTGCCCTTATTCCAGGCCTCAAAAAGATGGACAAGGCGACGGTGTTAGGCGACGCTATCAAGTACGTGAAGCAGCTACAAGAGCAAGTGAAGGTTCTAGAAACTGAAAGCAAAAGGAAAAGCGCGGAGTCTGTTGTGTATGTTGAGAAATCTGAGGTGTGCGGAGAGGAAGATGTGTCTGTGTCAGACACTTGGTCAAATTCAGGGGGGGATGGAAACTCATCGTACGAAGTGTCAAAAGCAGTGAGTAGGTCGGTGCTGCCTGAAGTGGAGGCAAGAGTGTCTGAGAAGAACGTCCTCATCCGGATCCACTGCGAGAAACACAAAGGAGTGTTGATGCACATTCTCAAGCTCATTGACAAACTCCATCTCTCTGTTCTTAACACCACTTCCTTGCCTTTTGGAGCCTCCATCGTCGACATAACCATCACTGCCGAGATGGATGACAAGTTCAGCTTAAGCGCGAAGGAGCTTGCTAGAAACATAAGGGTGGGAGTGTTGCAATCGATGTAG 801 0.4769 MISTEESWTTWLCDLEEEDYSFINGIIAAPNNYSNSQMSNNDNERPSKLLKSTTPTPRRRRTTGSAGTGRSPQHAHDHIIAERMRREKISQQFIALSALIPGLKKMDKATVLGDAIKYVKQLQEQVKVLETESKRKSAESVVYVEKSEVCGEEDVSVSDTWSNSGGDGNSSYEVSKAVSRSVLPEVEARVSEKNVLIRIHCEKHKGVLMHILKLIDKLHLSVLNTTSLPFGASIVDITITAEMDDKFSLSAKELARNIRVGVLQSM 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00669 266 MobiDBLite consensus disorder prediction 33 70 - -
Arst5g00669 266 Pfam Helix-loop-helix DNA-binding domain 78 123 IPR011598 GO:0046983
Arst5g00669 266 SMART finulus 79 128 IPR011598 GO:0046983
Arst5g00669 266 Coils Coil 112 139 - -
Arst5g00669 266 MobiDBLite consensus disorder prediction 33 76 - -
Arst5g00669 266 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 139 IPR036638 GO:0046983
Arst5g00669 266 PANTHER BHLH TRANSCRIPTION FACTOR 36 265 - -
Arst5g00669 266 Gene3D - 72 142 IPR036638 GO:0046983
Arst5g00669 266 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 73 122 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00669 Arst-Chr5 5675936 5677434 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00669 59 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 45.894 6.02e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst5g00669 HLH 1.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00669 - - ahf:112748090 484.567