Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00668 ATGGAGGAATTAAACGGATTGGCAACCAACTGGTTATCTGATCTGGATATAGATGATTACGAATTGTTTTCAGAGTGCAATTTGAAGAAGTTTCTGGATGAGGATGAAGAGAATCAGTTTGATGAGATGGTGATGAGTGCAGTGGTGGGGGAGGAGGAGGAAGAGGAGGAGGAGAGGCCAACTAAGCAACTCAGAACTTGCTCATCATCAAGCATCACTAACTACGTCTCATCTAATTCTTCTTCTTCTTCTTCTCCCACCTCCCAGATTCTGTCTTTTGAAAACTCTTACAACCCATCCTCCCAATTTTATGGCTTTGAATTTGATGCAACTCCTAATGATAAGGTTTCACCGCAACCACAAGTTGGTAATAACAATGATAAGAACAAGCTGGAACAAACAAGGAAACCTCAAAGCCAAGGGAGTAAGAGACAGGCGGCTCACTCTCACGATCACATCATGGCTGAGAGAAAGCGAAGGGAGAAGCTCAGCCAAAGCTTGATCGCCCTTGCAGCTCTTATTCCAGGCTTAAAAAAGATGGATAAGGCTTCGGTACTGGGAGATGCAATCAAGTACGTGAAAGAGCTTCAGGGGCGATTGAAGGTTCTAGAAGAAGAGAACAAGAGAGAGGTGGAGTCTGTGGTGATTGTGAAGAATCCACGCTTCATCACGAGCAGCAGCGACGATGACTCCTCGTCCTGTGATGATGACACCTTGGAAGCAGACGGCGAAGCAGCACTAGCACACGTGGAAGCAAGAGTGGCGGCGGCCGAGAAGGAGGTGCTGCTCCGGATCCATTGCAAGAAACAGAAGGGCATTTACGTCAAATTACTGTCGGAGATACAAAGCCTTCACCTGTACGTGGTCCATAGCAGTGTGCTACCGTTCGGGGATTCGGTTCTCGACATAACCATCGTCGCTCAGATGGGCACAGAATACAAGTTGAGCATAAGAGATCTTGTGAGGAATCTACGCGTGGCTACGCTGAAAACGATGTCGTCGTCATAG 1008 0.4712 MEELNGLATNWLSDLDIDDYELFSECNLKKFLDEDEENQFDEMVMSAVVGEEEEEEEERPTKQLRTCSSSSITNYVSSNSSSSSSPTSQILSFENSYNPSSQFYGFEFDATPNDKVSPQPQVGNNNDKNKLEQTRKPQSQGSKRQAAHSHDHIMAERKRREKLSQSLIALAALIPGLKKMDKASVLGDAIKYVKELQGRLKVLEEENKREVESVVIVKNPRFITSSSDDDSSSCDDDTLEADGEAALAHVEARVAAAEKEVLLRIHCKKQKGIYVKLLSEIQSLHLYVVHSSVLPFGDSVLDITIVAQMGTEYKLSIRDLVRNLRVATLKTMSSS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00668 335 MobiDBLite consensus disorder prediction 49 91 - -
Arst5g00668 335 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 147 196 IPR011598 GO:0046983
Arst5g00668 335 MobiDBLite consensus disorder prediction 114 128 - -
Arst5g00668 335 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 210 IPR036638 GO:0046983
Arst5g00668 335 Gene3D - 128 212 IPR036638 GO:0046983
Arst5g00668 335 Pfam Helix-loop-helix DNA-binding domain 152 197 IPR011598 GO:0046983
Arst5g00668 335 MobiDBLite consensus disorder prediction 64 91 - -
Arst5g00668 335 Coils Coil 186 213 - -
Arst5g00668 335 MobiDBLite consensus disorder prediction 145 159 - -
Arst5g00668 335 SMART finulus 153 202 IPR011598 GO:0046983
Arst5g00668 335 PANTHER BHLH TRANSCRIPTION FACTOR 35 331 - -
Arst5g00668 335 MobiDBLite consensus disorder prediction 108 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00668 Arst-Chr5 5657236 5659121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00668 7 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.176 5.71e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst5g00668 HLH 2.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00668 - - adu:107487595 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00668 5 5657236 5659121 Arst1g01604 1 24453848 24470105 PCT