Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00659 ATGGCTGCAGAGATTGGGCTTCTCTCAATGAGCCAGATCCAAAAATTGTCACAATCCCAACAACAACAACAACAACAAAAACACAAAACGAAAAGCAGCAACAACAACCACCGCCACCACCACCCTCCTCCACCTCCTTCAAACCCTAACTCATCCATCACCACCACCACTTGGATGTGGAACCCTAGGGAACAGCACCAAGAAGATGACGACTCTTGGGAGGTCAGAGCCTTTGCAGAGGACACTAGGAACATCATGGGAACCACGTGGCCACCGAGGTCCTACACCTGCACCTTCTGCAGGAGGGAGTTCCGCTCCGCCCAAGCCCTCGGCGGCCACATGAACGTCCACCGCCGAGATCGCGCTCGCCTCCACCACCACCAACCTCCTCTTCCTCCTCCTCCACCTCCTCCACCGCCTCCTCCTTCTCATCATCATCATCATCTTCATCAATATCCATCACCAGCAGCATTCATAAATGTCCCTCATCGTCATCATCAGGATCTGGTTTCAAATGCTACAGGGTTGTGCGTCTTCTATCATTTGCCACCAAGCCCTAATCGTACCACTCCCTTCGCTACTCCATCTCCGTCTCCATCCACTCTTCTCTCCATGACGTCATCTTCATCGTCATCTTATTACCCACAAAACAACTTGATGACGATGATGCAACCACTTTGCTCTCCCTCCCTTGACTTGCCATCCGGGATCAACGGCGTTTCTTCTTCTTCTCCAACTTACTCCACCAAAGTGATTGAAGAAGCCCTCGTTAACGACAATAATAACGGCCATCACCACCACCACCTTGAAGAGCTTGATCTAGAGCTGCGCTTGGGGCAAAAGCGACCACCAACTCGACCAAGCTAA 867 0.5156 MAAEIGLLSMSQIQKLSQSQQQQQQQKHKTKSSNNNHRHHHPPPPPSNPNSSITTTTWMWNPREQHQEDDDSWEVRAFAEDTRNIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHHHQPPLPPPPPPPPPPPSHHHHHLHQYPSPAAFINVPHRHHQDLVSNATGLCVFYHLPPSPNRTTPFATPSPSPSTLLSMTSSSSSSYYPQNNLMTMMQPLCSPSLDLPSGINGVSSSSPTYSTKVIEEALVNDNNNGHHHHHLEELDLELRLGQKRPPTRPS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00659 288 MobiDBLite consensus disorder prediction 128 142 - -
Arst5g00659 288 ProSiteProfiles Zinc finger C2H2 type domain profile. 95 122 IPR013087 -
Arst5g00659 288 SMART c2h2final6 95 117 IPR013087 -
Arst5g00659 288 MobiDBLite consensus disorder prediction 10 30 - -
Arst5g00659 288 PANTHER OS07G0101800 PROTEIN 67 281 - -
Arst5g00659 288 Pfam C2H2-type zinc finger 95 119 - -
Arst5g00659 288 SUPERFAMILY beta-beta-alpha zinc fingers 92 122 IPR036236 -
Arst5g00659 288 MobiDBLite consensus disorder prediction 122 150 - -
Arst5g00659 288 ProSitePatterns Zinc finger C2H2 type domain signature. 97 117 IPR013087 -
Arst5g00659 288 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00659 Arst-Chr5 5565509 5566914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00659 57 128 C2H2 Transcription Factor Family AT4G17810 73.333 1.76e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00659 - - adu:107487554 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00659 5 5565509 5566914 Arst5g00659 5 5565509 5566914 ECH