Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00656 ATGGCTGGTTTGGATTTAGGAACAGCTTCACGCTTCGTTCAAAACCTGCACAGACCAGAATTCAACCTGCATCACAACCATCATCATCAACAACATCATCATCATCATCATCACCAACAAGATTCTGAAGAAGACGCCAACAACAACCACCAAGATCACTATGAGGATGATGCTCCCCACGACCACACGGGTTTGGACCTCGCAACGGCCTCCGCGGGGGATGTCGTCGCACGCCGTCCTAGGGGTAGGCCGCCGGGATCCAAGAACAAGCCCAAGCCGCCGGTCATCATAACCAGGGAGAGCGCCAACACGCTCAGAGCACACATCCTCGAGGTAGCCAGCGGCTGCGACGTCTTTGACAGCGTCGCCACCTACGCCCGCCGCCGCCAGCGCGGGATCTGCATCCTCAGTGGCAGCGGCACCGTCAATAACGTCACCATCAGGCAACCAGCCGCCGCCGGAGCAGTAGTCACGCTCCACGGCAGGTTCGAGATATTGTCCCTCTCCGGCTCGTTCCTTCCGCCGCCGGCTCCCCCCGGCGCCACCAGCCTAAGCATATACCTCGCCGGAGGGCAGGGACAGGTGGTCGGAGGGAGTGTGGTTGGGGAGTTGATCGCGGCGGGGCCGGTGATTGTGATCGCTTCTTCGTTCACGAACGTGGCTTATGAGAGGTTGCCTTTGGACGAAGATGAACAGCAGCTTCCAGGTGGCGGCGGCGGTCAGGGTTCCGGTGGTGGTGGTGGTAATAGTCCGTTTGGTGACCCGTCCTCAGGGCTTCCTTTCTTTAATTTGCCGGTGAATATGCCGAATAATGTTCAGTTGCCATCAGCAGTGGATGGGTTTTCACGTCCGCCACCACCACCACCACCACCATTTTAA 879 0.5836 MAGLDLGTASRFVQNLHRPEFNLHHNHHHQQHHHHHHHQQDSEEDANNNHQDHYEDDAPHDHTGLDLATASAGDVVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVASGCDVFDSVATYARRRQRGICILSGSGTVNNVTIRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLSIYLAGGQGQVVGGSVVGELIAAGPVIVIASSFTNVAYERLPLDEDEQQLPGGGGGQGSGGGGGNSPFGDPSSGLPFFNLPVNMPNNVQLPSAVDGFSRPPPPPPPPF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00656 292 FunFam AT-hook motif nuclear-localized protein 105 232 - -
Arst5g00656 292 MobiDBLite consensus disorder prediction 37 63 - -
Arst5g00656 292 Gene3D - 105 234 - -
Arst5g00656 292 Pfam Plants and Prokaryotes Conserved (PCC) domain 106 219 IPR005175 -
Arst5g00656 292 MobiDBLite consensus disorder prediction 26 96 - -
Arst5g00656 292 ProSiteProfiles PPC domain profile profile. 102 238 IPR005175 -
Arst5g00656 292 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 32 241 IPR014476 GO:0003680
Arst5g00656 292 SUPERFAMILY AF0104/ALDC/Ptd012-like 102 233 - -
Arst5g00656 292 MobiDBLite consensus disorder prediction 230 264 - -
Arst5g00656 292 CDD DUF296 106 189 IPR005175 -
Arst5g00656 292 MobiDBLite consensus disorder prediction 273 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00656 Arst-Chr5 5496872 5498153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00656 1 281 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 65.902 2.70e-97 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00656 - - qsu:111992217 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00656 5 5496872 5498153 Arst1g01620 1 26177198 26178551 PCT