Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00630 ATGGTTTGCACTGCCAATGATTTACATGGTTGGAAGGACTTTCCAAAGGGTCTTAGGGTTCTTCTCCTTGAAAGAGACAGCACTTCTGCTTCTGAGATAAGAGCCAAACTTGAGGCCATGGACTATCACGTTTCTACCTTCTACGATGAGAATGAAGCATTGTCAGAAATTTCAAATAGGCTCGAAGGATTCCATGTGGCCATTGTGGAGGTGAGTACAAGTAGCAGCCAGAGAGGCTTTAAATTTCTTGAGAATGCCAAGGACTTGCCAACCATCATGACTTCAGATACTCAGTGCTTGAGCACTATGATGAAGTGCATTGCGCTTGGCGCTGTTGAGTTCCTATGTAAACCACTCTCTGAGGACAAACTCAGAAATATCTGGCAGCATGTGGTTCATAAGGCATTCAATGCTGGGGCAAGTGTCTTGTCCGAATCACTAAAACCGGTTAAAGAGTCTGTAGAATCCATGTTGCAGCTGCAAACAGAAAATGGACATCTTGAGAGTAAAATTTCCATTGATTTAGAGAATATATCAAGGTTTAGTGATAATTACCATGAGCAGTCTGCCGGAAGTGATAAATATCCGGCTCCTTCGACACCTCAATTAAAACAGGGAGCAAGGTTACTGGATGATGGTGATTGCCAAGAGCATACAAATTGCTCGAATGAAAAAGAAAGTGGGGAACATGAAGGGGAATCTAAATCTGTTGAAGCATCAAGTGAGAATTTGAATGAAGGTACTCAACCACAGAAACCTGAAGAGACTCTAATTAAACAGGAAGAGGATTTTGTTGCTGATGGTTCCAATGGTGAAAGTACTGTTCCTTTGAATCCTCATGATAGAAGGTCTCTTAGAAGCACCAATGGAAATATAACATCTCCAAATAAAGCAGTGGTCCTTAGTGATACTTGTCAAAACAAAGCTAACCGGAAGAAGTTGAAAGTAGACTGGACTCCTGCATTGCACAAAAAGTTTGTGCAGGCAGTGGAACAATTAGGTATTGATCAAGCCATTCCTTCTCGCGTACTGGAGCTGATGAAAGTGGAGGGCTTGACTAGGCATAATGTGGCAAGCCATCTTCAGAAATACAGACTACATAAGAGACAAATGATGCCCAAGGAAGAAGATCGAAGATGGCAAAATCAAAGAGATACCGTGCGCTGGAAAAGGCCAGTTATGGCCTATCCTCCACATCATTATAATCATGGCCTGTCTCCACCTCCTGTATATCCAATGTGGGGACAATCCGGAACTCAAACAACCGGTGCACAGTTTTGGGGACCTCCTGGTTATACCTGGTTGCGGCCTACAGAAAATTGGCACTGGAAGCCTTTTCCAGGGGTGCATGTGGATGCATGGGGTTGTCCAGTGTTACCAGCTACTCAAGCTCCTTACCTTTCTTACACTCAACATATGGCTGGATTGCACAATGGTAAATCAGCGGATTATAGATATGGCATGCCACCAAGTTCATTTGGGCATTATCCGGCAGATGAAGTTGTTGACAAAGTTGTAAAGGAAGCAATAAGCAAGCCATGGCTACCGTTACCCTTGGGCCTCAAGCCTCCTTCCACGGACAGCGTGTTGGCCGAGCTCTCCAGGCAAGGCATATCCCCCATCCCTCTTGACTCTAAGGGCTCTAAACCCTGCTGA 1656 0.4444 MVCTANDLHGWKDFPKGLRVLLLERDSTSASEIRAKLEAMDYHVSTFYDENEALSEISNRLEGFHVAIVEVSTSSSQRGFKFLENAKDLPTIMTSDTQCLSTMMKCIALGAVEFLCKPLSEDKLRNIWQHVVHKAFNAGASVLSESLKPVKESVESMLQLQTENGHLESKISIDLENISRFSDNYHEQSAGSDKYPAPSTPQLKQGARLLDDGDCQEHTNCSNEKESGEHEGESKSVEASSENLNEGTQPQKPEETLIKQEEDFVADGSNGESTVPLNPHDRRSLRSTNGNITSPNKAVVLSDTCQNKANRKKLKVDWTPALHKKFVQAVEQLGIDQAIPSRVLELMKVEGLTRHNVASHLQKYRLHKRQMMPKEEDRRWQNQRDTVRWKRPVMAYPPHHYNHGLSPPPVYPMWGQSGTQTTGAQFWGPPGYTWLRPTENWHWKPFPGVHVDAWGCPVLPATQAPYLSYTQHMAGLHNGKSADYRYGMPPSSFGHYPADEVVDKVVKEAISKPWLPLPLGLKPPSTDSVLAELSRQGISPIPLDSKGSKPC 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00630 551 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 542 IPR044825 GO:0003700|GO:0045893
Arst5g00630 551 MobiDBLite consensus disorder prediction 271 295 - -
Arst5g00630 551 MobiDBLite consensus disorder prediction 238 254 - -
Arst5g00630 551 MobiDBLite consensus disorder prediction 185 255 - -
Arst5g00630 551 FunFam Two-component response regulator 309 372 - -
Arst5g00630 551 SUPERFAMILY CheY-like 16 134 IPR011006 -
Arst5g00630 551 Gene3D - 15 135 - -
Arst5g00630 551 MobiDBLite consensus disorder prediction 185 199 - -
Arst5g00630 551 MobiDBLite consensus disorder prediction 210 237 - -
Arst5g00630 551 Pfam Myb-like DNA-binding domain 316 365 IPR001005 -
Arst5g00630 551 Gene3D - 309 371 - -
Arst5g00630 551 MobiDBLite consensus disorder prediction 267 295 - -
Arst5g00630 551 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 310 369 IPR017930 -
Arst5g00630 551 FunFam Two-component response regulator-like APRR2 17 143 - -
Arst5g00630 551 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Arst5g00630 551 NCBIfam myb-like DNA-binding domain, SHAQKYF class 313 368 IPR006447 GO:0003677
Arst5g00630 551 SUPERFAMILY Homeodomain-like 312 370 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00630 Arst-Chr5 5259545 5265674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00630 1 545 Response Regulator Gene Family AT4G18020 48.870 3.57e-143 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Arst5g00630 Myb_DNA-binding 3.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00630 - - ahf:112747948 1100.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00630 5 5259545 5265674 Arst1g01685 1 29193572 29200047 PCT