Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst5g00594 | ATGGAGGAACGCTATGAGCCAATCAAGGACCTTGGTTCTGGAAATTTCGGAGTTGCTAGGTTGGCTAAAGACAAGAAAACAGGGGAGCTTGTTGCTGTTAAATACATTCAAAGGGGTAAAAAGATTGATGAGAATGTTCAAAGGGAGATAATTAACCACCGATCTCTAAGGCACCCTAACATTATCAGGTTCAAAGAGGTGTTTCTCACTCCAACTCATTTAGCTATTGTTCTGGAATATGCTGCTGGTGGTGAACTCTTTGGGAGGATTTGCACAGCTGGTCGATTTAGCGAAGATGAGGCAAGATTTTTCTTCCAGCAACTCATATCTGGAGTTAGCTACTGTCATTCAATGCAAATTTGTCATAGAGATCTGAAACTGGAAAACACTCTCTTGGACGGTAATCCAGCACCTCGACTTAAGATTTGTGACTTCGGTTTCTCCAAGTCTGCATTGCTGCATTCGCAGCCTAAGTCAACAGTTGGAACACCAGCATATATTGCTCCAGAGGTTTTGTCTCGAAAGGAGTATGATGGAAAGATTGCAGATGTTTGGTCATGTGGGGTGACTCTGTATGTAATGTTAGTTGGAGCATACCCATTTGAAGATCCAGAAGATCCTAGAGACTTCAGAAAGACTATTGGGAGTGTAGGCATCTTCTCACTTGCATTTTTGTTGCCAATCCAGCCAAGAGGATTACTATTCCGGAGATAA | 714 | 0.4244 | MEERYEPIKDLGSGNFGVARLAKDKKTGELVAVKYIQRGKKIDENVQREIINHRSLRHPNIIRFKEVFLTPTHLAIVLEYAAGGELFGRICTAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGNPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRDFRKTIGSVGIFSLAFLLPIQPRGLLFRR | 237 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst5g00594 | 237 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 80 | - | - | |
| Arst5g00594 | 237 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 120 | 132 | IPR008271 | GO:0004672|GO:0006468 | |
| Arst5g00594 | 237 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 216 | IPR011009 | - | |
| Arst5g00594 | 237 | SMART | serkin_6 | 5 | 235 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Arst5g00594 | 237 | PANTHER | SERINE/THREONINE KINASE | 3 | 212 | - | - | |
| Arst5g00594 | 237 | FunFam | Serine/threonine-protein kinase SRK2A | 81 | 229 | - | - | |
| Arst5g00594 | 237 | PIRSF | ILK | 2 | 219 | - | - | |
| Arst5g00594 | 237 | ProSitePatterns | Protein kinases ATP-binding region signature. | 11 | 34 | IPR017441 | GO:0005524 | |
| Arst5g00594 | 237 | Pfam | Protein kinase domain | 5 | 214 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Arst5g00594 | 237 | ProSiteProfiles | Protein kinase domain profile. | 5 | 237 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Arst5g00594 | 237 | FunFam | Serine/threonine-protein kinase SRK2E | 1 | 80 | - | - | |
| Arst5g00594 | 237 | Gene3D | Transferase(Phosphotransferase) domain 1 | 81 | 228 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Arst5g00594 | Arst-Chr5 | 4905030 | 4907029 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Arst5g00594 | 4 | 203 | CBL-interacting serine-threonine protein kinases | AT2G26980 | 46.948 | 3.58e-59 | 191 |
Transcription factors information