Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00594 ATGGAGGAACGCTATGAGCCAATCAAGGACCTTGGTTCTGGAAATTTCGGAGTTGCTAGGTTGGCTAAAGACAAGAAAACAGGGGAGCTTGTTGCTGTTAAATACATTCAAAGGGGTAAAAAGATTGATGAGAATGTTCAAAGGGAGATAATTAACCACCGATCTCTAAGGCACCCTAACATTATCAGGTTCAAAGAGGTGTTTCTCACTCCAACTCATTTAGCTATTGTTCTGGAATATGCTGCTGGTGGTGAACTCTTTGGGAGGATTTGCACAGCTGGTCGATTTAGCGAAGATGAGGCAAGATTTTTCTTCCAGCAACTCATATCTGGAGTTAGCTACTGTCATTCAATGCAAATTTGTCATAGAGATCTGAAACTGGAAAACACTCTCTTGGACGGTAATCCAGCACCTCGACTTAAGATTTGTGACTTCGGTTTCTCCAAGTCTGCATTGCTGCATTCGCAGCCTAAGTCAACAGTTGGAACACCAGCATATATTGCTCCAGAGGTTTTGTCTCGAAAGGAGTATGATGGAAAGATTGCAGATGTTTGGTCATGTGGGGTGACTCTGTATGTAATGTTAGTTGGAGCATACCCATTTGAAGATCCAGAAGATCCTAGAGACTTCAGAAAGACTATTGGGAGTGTAGGCATCTTCTCACTTGCATTTTTGTTGCCAATCCAGCCAAGAGGATTACTATTCCGGAGATAA 714 0.4244 MEERYEPIKDLGSGNFGVARLAKDKKTGELVAVKYIQRGKKIDENVQREIINHRSLRHPNIIRFKEVFLTPTHLAIVLEYAAGGELFGRICTAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGNPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRDFRKTIGSVGIFSLAFLLPIQPRGLLFRR 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00594 237 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Arst5g00594 237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Arst5g00594 237 SUPERFAMILY Protein kinase-like (PK-like) 3 216 IPR011009 -
Arst5g00594 237 SMART serkin_6 5 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00594 237 PANTHER SERINE/THREONINE KINASE 3 212 - -
Arst5g00594 237 FunFam Serine/threonine-protein kinase SRK2A 81 229 - -
Arst5g00594 237 PIRSF ILK 2 219 - -
Arst5g00594 237 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Arst5g00594 237 Pfam Protein kinase domain 5 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00594 237 ProSiteProfiles Protein kinase domain profile. 5 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00594 237 FunFam Serine/threonine-protein kinase SRK2E 1 80 - -
Arst5g00594 237 Gene3D Transferase(Phosphotransferase) domain 1 81 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00594 Arst-Chr5 4905030 4907029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00594 4 203 CBL-interacting serine-threonine protein kinases AT2G26980 46.948 3.58e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Arst5g00594 Pkinase 1.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00594 K14498 - gmx:100817713 422.165