Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00590 ATGAAACCAAAGAACCTTCCTGCTTTGAATCTACTCTCTCAACAACTTTCTTACCGTAATTCTCACCTCACCATGGAAGAAATTCCAACCTTTCTAAACTCCAGTGTGATGAAGAAGGTTCCTGTGACGAATAACGAGAATAAAGGTTCACAGTTGACAATCTTCTATGGCGGTGAAGTTATAGTGTTCGATGATATTGAAGCGGAGAAAGTGAAAGAGATGATGTGTCTTGCAAGCAAAGGTTCATCATCAACGATCTCGCAATCAAACCATCACAAAAACAATATCAATAATAATAATAATTACGGTTACAGAGTGGCTCGGCGATGTTCATTTCCTTCGCTACCTAATGATGTGGTTCGGAATACAAGTTCTTGTGTTGCTCCTCCAACTTCTCCTTTTCCTTTTATGATTCCTGCTACCATTCCCAACAATTCGGTTAAGGATCAGCATCCTCAACCACCTTCCAGATCCGTTGTTTCTGATCTACCACTTGCTAGGAAAGCTTCACTACACCGATTCTTGGAGAAGAGAAAGGATAGAATTGCTGCGAGATCACCGTATCAAACAAGCAGCCCCATGTCATGGCTTTCCATGGTAGTTAGATCACCACAGGAGAATTCTGAGACTAGCTCCAGTGTAGTGTAG 648 0.4167 MKPKNLPALNLLSQQLSYRNSHLTMEEIPTFLNSSVMKKVPVTNNENKGSQLTIFYGGEVIVFDDIEAEKVKEMMCLASKGSSSTISQSNHHKNNINNNNNYGYRVARRCSFPSLPNDVVRNTSSCVAPPTSPFPFMIPATIPNNSVKDQHPQPPSRSVVSDLPLARKASLHRFLEKRKDRIAARSPYQTSSPMSWLSMVVRSPQENSETSSSVV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00590 215 SMART tify_2 45 80 IPR010399 -
Arst5g00590 215 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 10 198 IPR040390 -
Arst5g00590 215 Pfam Jas motif 164 189 IPR018467 -
Arst5g00590 215 MobiDBLite consensus disorder prediction 184 215 - -
Arst5g00590 215 ProSiteProfiles Tify domain profile. 45 80 IPR010399 -
Arst5g00590 215 MobiDBLite consensus disorder prediction 185 215 - -
Arst5g00590 215 Pfam tify domain 48 79 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00590 Arst-Chr5 4900031 4901467 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00590 46 201 Tify Gene Family AT1G19180 33.333 5.97e-22 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Arst5g00590 tify 2.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00590 K13464 - gmx:100306332 162.925