Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00560 ATGTGCCGCCAAAATTCTCCCGTTCACCATTCCGGCGACGAAGACACCGCCGCCGACGAGAGCCTCTTGATTTACTGCAAGCCTGTTGAGCTTTACAACATCCTCTACCGTCGCTCACTTCACAACCCTTCATTTCTTAGGAGATCTCTGCGGTATAAAATAAAAGCAAGGCGTAAAAGGAGGTTGAGGGGAGGAATTGTGATTTTCAACTACAGGGATTGTTACAACATGATACGAAAGACTGAAGTGACTGAACATTTTTCTTGTCCATTTTGCTTGATGCAATGTGCCAGCTTTAAGGGTTTGCGATTTCATCTTTGTTCATCACATGATCTATTCAACTTTGAGTTCTGGGTGACTGATGATTACCAAGCAGTTAATGTCTCTGTAAAAATTGATATATTGAGATCAGAGAGTGTTGCTGACGGAGTAAATCCACAATCACAAACCTTCATCTTCTGTTCAAGACCCCGAAAACATTTACGAAAGGACTCTGTTCAAAATGAAAAACGAGCCAATGTAAAGTTCCTAGAGTTGGACTCACCAGAGGGAACACAGAATGGATTTCTAGAGAAGAATGATGATATCCTTTCCTACAAAGGGGAGAATATGTCTAAAACATGTCATATTCAGAAGAATTTACAAATGGAAAAACAAGGTGTCGAAAGATTTGGTCCCGATGTTCCTGGCACTGCAGACTGCCTCGAATATGTTGCATCCAGTTTCAACATTCAAGGTGTTTCAATTGCCATGCCGCAATCTTCAGGAGATCCAGAAACTAGTAAGTCAGTATATAGAAGTGATCCTGCTGTGCCTGCTAAAACAAAGAAGTTAAACATGGATCGATCTGACTCAAAAAACCGAATGCTCCTGCAGAAGAGACAGTTCTTTCACTCACATAGAGTTCAGCCTATGGCTCTAGAACAAGTGTTATCAGATCGCGATAGTGAAGATGAAGTTGATGATGACATTGCAGATCTTGAAGATCGAAGGATGCTTGATGATTTTGTGGATGTTTCCAAAGATGAAAAGCAACTCATGCATCTGTGGAACTCTTTTATGAGGAAGCAAAGAGTGCTGGCTGATGGCCATGTTTCGTGGGCATGTGAGGCATTTTCCAAGCTTCACGGAAAAGAGCTAATCTCATCCCCAGCTTTATTTTGGTGTTGGAGGTTATTCATGATCAAACTTTGGAATCACGGTCTTCTTGATGCTTGCACAATGAACAACTGTAGTATAATATTAGATAGTTACAGAAATGAAGGGTTGGATAACGGCAAGAAGTAG 1287 0.4126 MCRQNSPVHHSGDEDTAADESLLIYCKPVELYNILYRRSLHNPSFLRRSLRYKIKARRKRRLRGGIVIFNYRDCYNMIRKTEVTEHFSCPFCLMQCASFKGLRFHLCSSHDLFNFEFWVTDDYQAVNVSVKIDILRSESVADGVNPQSQTFIFCSRPRKHLRKDSVQNEKRANVKFLELDSPEGTQNGFLEKNDDILSYKGENMSKTCHIQKNLQMEKQGVERFGPDVPGTADCLEYVASSFNIQGVSIAMPQSSGDPETSKSVYRSDPAVPAKTKKLNMDRSDSKNRMLLQKRQFFHSHRVQPMALEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFMRKQRVLADGHVSWACEAFSKLHGKELISSPALFWCWRLFMIKLWNHGLLDACTMNNCSIILDSYRNEGLDNGKK 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00560 428 CDD VEFS-box_EMF2-like 291 418 - -
Arst5g00560 428 Pfam VEFS-Box of polycomb protein 278 413 IPR019135 -
Arst5g00560 428 CDD ZnB-Zn_EMF2-like 13 134 - -
Arst5g00560 428 PANTHER POLYCOMB GROUP PROTEIN 9 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00560 Arst-Chr5 4693388 4701355 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00560 1 68 C2H2 Transcription Factor Family AT5G51230 51.471 2.19e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00560 - - gmx:100807112 711.449