Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00555 ATGTCATCGATAATACTCTGCACTTTTTTGACTTTATCTCTTTCACATTTACTTTCATGGCACGCTCGTGCAGAACCGGTTCTCCAGCTTTGGAGCCCGCAGAACCACCCTGACCCTGCTTTGGAACTGAAACATCTCGCCAACGACGTCGTATTTGAGCTCCTAATTTCTCAAACATGTAGCAGCATCAAAATTTCCATGGCTTCAGCAACCTTTTTCATCGCTTCCCTTCTCTTTCTTCACATCACACTAGCCTTTGCCAACATTACCATAAATTCAACACTCTCCACCACCAACAACAACAATGCATGGCGTTCATCTTCAGGTGAATTTGCTTTTGGATTTCACCAACTCAGAGACACAAATCTCTTCATAGTTGCCATATGGTACGACAAAATACCAGAAAAAACCATAGTTTGGAGTTCATATTCACTCAGCAATCCAACACCAACAGGATCAAAGATTCAGTTAACACCATCAGGTCTAAAGCTAACAACTCCCAATGGTGAATCCACATGGATAGCACAAACCAACAACCCTGTTTCCCATGGTTCTATGCTTGACACTGGAAACTTTGTTCTTGCAAGCAGTGATAACAAGAAACTTTTGTGGCAAAGTTTCAAGAACCCCACAGATACTTTGTTGCCAAACCAAACTGTTGAATCTGATGCCACTCTCACTTCTAGATTGAGTGATACAAACTACACAAGAGGGAGGTTTCAACTCTATTTTCAGAATGACACCATCATGTTAAGTCCTCTAGCATGGCCTACCGAATTTCGCTATGATTACTACGATGTTTTCGGACATGCTGCACGCTTGGTGTTTGATGAAAGTGGTGAGATATATCTGGAGACAGAGAATGGTAATAGAACAACACCACAAGCTCCTAAATGGCAACCCAATTTAGCTCTTGATCCTAGGAACAATTACTATAGAGCAACACTTGATTACTTTGGAGTTTTAACTCAATATGTTCATCCAAAGGACTCAAATTCTCAGCAAGGGTGGAGAGTTTTAAGGTACACTCCTAGTAACATTTGCACAAGTATTTTCAATGATTATGGAAGTGGTGCTTGTGGTTACAATAGCTATTGCTCCATGGAAGAACAGAGGCCTACTTGCAATTGCCCTGATGGGTATACTCTGATTGATCCAAGCAATGTTTTTGGTGGATGCCAACCAAATTTCACTCTTGGTTGTGGAGCAGATAATTATGGCAAAGAATTGCAAGCGCGCCCAGAAGATCTATATAATTTTAGTGTTTTGAGTGATGTGGATTTTCCTCTTAATGATTATGAGCAGATTCAACCTTATTCTCAAGATGAGTGCCAGCAAGATTGTTTAAATGATTGCAATTGTGCTGTTGCAATCTATACCAACAATCAAACCTGTTGGAAGAAGAGGTTGCCTCTTTCTAACGGAAGAACACAAAGTGGAGGTCAAACAATACTTATCAAAACAAGAGTTGCACCTCTTGGCATTCCCACTGGTGCTGAATCAAAGAAAGATCATAATAAGATTAAGCCAGGTTTTCATGGATTACTTATTGGATCGCTTGTCATCAATGTTGTACTCCTGGCTGCAGTTCTTTTGGCTTTTCACCTGAAGAAGCGAAAAAGGGACATCAAAGTCTCAAGTCTTCTAGAAACAAATCTGCATTCTTTTAGCTATGAAGCACTGAAGGATGCAACACGGGAGTTTAGCGAAGAACTGGGACGGGGTTCCTTTGGCATTGTTTACAAAGGAACCATAGAATCAAGGTTTTATAATGTGGTGGCAGTCAAGAAGCTTGACAGATTGGCACAAGAAGGAGAGAAGGAATTCAAGGCTGAGTTGAGTGCCATTGGTAAAACCTGCCACAAGAATCTGGTAAGGTTGATTGGATTCTGTGATGAGGGAACTAACAGAATGCTTGTCTATGAGTTCATGAGCAAAGGTGCTCTGGCAAACTTCCTATTTGGACAAACCAAACCCATTTGGGATCTAAGGGTAAGGTTTGCTTTGGGGATTGCAAGAGGGTTGGTGTACTTGCATGAAGAGTGTGACACTCCCATCATTCATTGTGACATAAAACCTCAGAATATACTCATAGATGATAACTTCAATGCAAAGATATCTGACTTCGGGTTGGCCAAGTTGTTGTTGTCTGATCAGAGCAGGACCAACACCATGATCCGAGGAACAAGAGGTTATGTTGCTCCGGAATGGTTCAGGAATGTTCCTGTGACGGTTAAGGTGGATGTTTATAGCTTCGGCGTTATGTTACTAGAGATCATTTGAGATGCATTGGTGGATGATGATACGGAGGCTATAGCTGACAGTGGAAGGTTACAAAGGTGGGTGAAGATAGCAATTTGGTGCATTCAAGAGCATCATGAAAAGAGGCCAACAATGGGGATTGTGTTGCAAATGCTTGAAGGCTTGGTTGAAGTCTCGGATCCACCATCACCCTTTTCTTTAAATCCGGTTTCTTCACTGCCCCACAGCCACAGCCAAGAACCAAGATAA 2511 0.417 MSSIILCTFLTLSLSHLLSWHARAEPVLQLWSPQNHPDPALELKHLANDVVFELLISQTCSSIKISMASATFFIASLLFLHITLAFANITINSTLSTTNNNNAWRSSSGEFAFGFHQLRDTNLFIVAIWYDKIPEKTIVWSSYSLSNPTPTGSKIQLTPSGLKLTTPNGESTWIAQTNNPVSHGSMLDTGNFVLASSDNKKLLWQSFKNPTDTLLPNQTVESDATLTSRLSDTNYTRGRFQLYFQNDTIMLSPLAWPTEFRYDYYDVFGHAARLVFDESGEIYLETENGNRTTPQAPKWQPNLALDPRNNYYRATLDYFGVLTQYVHPKDSNSQQGWRVLRYTPSNICTSIFNDYGSGACGYNSYCSMEEQRPTCNCPDGYTLIDPSNVFGGCQPNFTLGCGADNYGKELQARPEDLYNFSVLSDVDFPLNDYEQIQPYSQDECQQDCLNDCNCAVAIYTNNQTCWKKRLPLSNGRTQSGGQTILIKTRVAPLGIPTGAESKKDHNKIKPGFHGLLIGSLVINVVLLAAVLLAFHLKKRKRDIKVSSLLETNLHSFSYEALKDATREFSEELGRGSFGIVYKGTIESRFYNVVAVKKLDRLAQEGEKEFKAELSAIGKTCHKNLVRLIGFCDEGTNRMLVYEFMSKGALANFLFGQTKPIWDLRVRFALGIARGLVYLHEECDTPIIHCDIKPQNILIDDNFNAKISDFGLAKLLLSDQSRTNTMIRGTRGYVAPEWFRNVPVTVKVDVYSFGVMLLEIIXDALVDDDTEAIADSGRLQRWVKIAIWCIQEHHEKRPTMGIVLQMLEGLVEVSDPPSPFSLNPVSSLPHSHSQEPR 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00555 836 Gene3D Hepatocyte Growth Factor 419 484 - -
Arst5g00555 836 CDD PAN_AP_plant 397 488 - -
Arst5g00555 836 SMART blect_4 95 210 IPR001480 -
Arst5g00555 836 FunFam Os07g0541700 protein 644 729 - -
Arst5g00555 836 FunFam S-receptor-like serine/threonine-protein kinase 535 643 - -
Arst5g00555 836 PIRSF SRK 760 836 IPR024171 GO:0004674
Arst5g00555 836 PIRSF SRK 60 763 IPR024171 GO:0004674
Arst5g00555 836 Pfam PAN-like domain 420 466 IPR003609 -
Arst5g00555 836 Gene3D Transferase(Phosphotransferase) domain 1 644 815 - -
Arst5g00555 836 Pfam Protein kinase domain 568 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00555 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 124 250 IPR036426 -
Arst5g00555 836 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 93 818 - -
Arst5g00555 836 ProSiteProfiles Bulb-type lectin domain profile. 89 207 IPR001480 -
Arst5g00555 836 ProSiteProfiles PAN/Apple domain profile. 401 491 IPR003609 -
Arst5g00555 836 ProSiteProfiles Protein kinase domain profile. 566 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00555 836 Gene3D Phosphorylase Kinase; domain 1 530 643 - -
Arst5g00555 836 SMART serkin_6 566 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00555 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 686 698 IPR008271 GO:0004672|GO:0006468
Arst5g00555 836 Gene3D - 87 209 IPR036426 -
Arst5g00555 836 Pfam D-mannose binding lectin 149 224 IPR001480 -
Arst5g00555 836 ProSitePatterns Protein kinases ATP-binding region signature. 572 597 IPR017441 GO:0005524
Arst5g00555 836 SUPERFAMILY Protein kinase-like (PK-like) 543 807 IPR011009 -
Arst5g00555 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 84 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00555 Arst-Chr5 4661632 4673838 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00555 507 806 Receptor kinase-like Gene Family AT4G04510 37.910 3.08e-59 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst5g00555 Pkinase 2.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00555 - - adu:107487498 1666.36