Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00553 ATGGCGAACCCAGCTGAACTTTCTGCCCTCAATCAAATCAAAATTCATCTTCTTGGAGAACTCTCACCACTTCCTCATAACTCTTCCTTCTCCTTCCAATTTTACCAAACTAACCCTACTACTTCTTCTTCCTCCTCCTCCTCTTCTTCTTCTTCTGCTTCGGTCAACCAATACTTTAACTGCAACGAAGTGGTCAACAACCTAGAAACGCCAAGATCCAAACCGCACTCATCGGCGTCTTCGTCGAACCGAAAACCGTCTCTGCAAATCTCTCTCCCTAAGAAAACCGAATGGATCCAATTCGGAGAGGAGAAGGAGATTTCCAAGAGCAGCGAACAACAGAAGAAGAAGCACTATAGAGGGGTAAGACAGAGACCGTGGGGAAAGTACGCCGCCGAGATTCGAGATCCTAACAAGCGAGGCTCCAGAGTCTGGCTTGGAACATTCGACACCGCCATCGATGCCGCCAAGGCTTACGACCGCGCCGCCTTTAAGCTCCGCGGCTCAAAAGCCATCCTCAACTTCCCTCTCGAAGCCGGCGCCGATGACAGGAAGCGCCCCCGTCAAGAGGAGGAGGTGGAGGAGAAGCCGGTCGTCAAGAAGGAGAAGATGGAGGAATCATCTGACGTTAGTGGTGTAAGAGATATTCCGTTAACGCCGTCTAGTTGGACTGGCTTTTGGGACGCTGACGTAACTGGTATTTTCAGTGTGCCACCGTTATCGCCGTTATCTCCCCACCCGGCGTTGGGATTTCCACAGCTTATGGTTGTGTGA 774 0.5103 MANPAELSALNQIKIHLLGELSPLPHNSSFSFQFYQTNPTTSSSSSSSSSSSASVNQYFNCNEVVNNLETPRSKPHSSASSSNRKPSLQISLPKKTEWIQFGEEKEISKSSEQQKKKHYRGVRQRPWGKYAAEIRDPNKRGSRVWLGTFDTAIDAAKAYDRAAFKLRGSKAILNFPLEAGADDRKRPRQEEEVEEKPVVKKEKMEESSDVSGVRDIPLTPSSWTGFWDADVTGIFSVPPLSPLSPHPALGFPQLMVV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00553 257 PRINTS Ethylene responsive element binding protein signature 119 130 IPR001471 GO:0003700|GO:0006355
Arst5g00553 257 PRINTS Ethylene responsive element binding protein signature 158 178 IPR001471 GO:0003700|GO:0006355
Arst5g00553 257 SMART rav1_2 118 182 IPR001471 GO:0003700|GO:0006355
Arst5g00553 257 Gene3D AP2/ERF domain 117 178 IPR036955 GO:0003700|GO:0006355
Arst5g00553 257 MobiDBLite consensus disorder prediction 66 89 - -
Arst5g00553 257 ProSiteProfiles AP2/ERF domain profile. 118 176 IPR001471 GO:0003700|GO:0006355
Arst5g00553 257 MobiDBLite consensus disorder prediction 182 214 - -
Arst5g00553 257 MobiDBLite consensus disorder prediction 32 54 - -
Arst5g00553 257 MobiDBLite consensus disorder prediction 182 210 - -
Arst5g00553 257 SUPERFAMILY DNA-binding domain 118 177 IPR016177 GO:0003677
Arst5g00553 257 PANTHER DNA-BINDING DOMAIN 54 192 IPR044808 GO:0003700|GO:0009873
Arst5g00553 257 CDD AP2 117 176 IPR001471 GO:0003700|GO:0006355
Arst5g00553 257 FunFam Ethylene-responsive transcription factor 2 117 178 - -
Arst5g00553 257 MobiDBLite consensus disorder prediction 104 123 - -
Arst5g00553 257 Pfam AP2 domain 118 168 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00553 Arst-Chr5 4620274 4621260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00553 1 257 AP2-EREBP Transcription Factor Family AT5G47230 47.000 1.59e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst5g00553 AP2 1.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00553 K09286 - gmx:100808173 267.314