Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00522 ATGGCAGAAGACAGATATGAAACCTGTTCTGAAGGTTCTGCATGTTCTCAAATGGGAAGCAATAATAAGTGCAAGCATGTGTTTGATAGATTATGCGGTTTTGCACCTTCATGGAATTGGAACACAACCACCACAACCACACTACCACCACCACCAAGTGGCAGAAGAATCTTCCATAGAGATGTTGAAAAAGAAGCATTCCAATATGCAAGTAGTAGCCATTGCCTCTCATCCTACTACAGTGTCTTTGTTGTTCGCCTAGCAATCATGGTGATGCTAGCAATCTTGATAGGGCTACTTACTATTCTAACATGGCATTTCACCAAGATTTACACAACAAAATCACTCAAAACCCTGGCATATGATCTGCGTTACGAGCTTCTTCAACGCCCAATCTTGAGGATGTGGAACATTCTGAATTCTACGGCCGAGATCACCACGGCTCAGGTGAAGCTTTCTCAGTATGTGATCAGGCGTTACAGCAACCCTGTTAATCAAGCAGAGCAAGTTGAGCAGCTGTATGAAGCAATGAGGGCTATAACATGGGCATTGTTTTCTAGTAAGAAAGCTCTGAACTCCATAACCATCAATTATAAGAATGGATTTGTCCAAGCTTTCCATAGAGATCTTAAGGATAACAACACATCTTACATCTATTCGGATCTCTCGAATTACTCTATGGTTGCTAATGAGATGAATTCCTTTTCGGCGCATCAGGCTTGGAATGATAAGGCCATTCATGGTAACAAATCAGCAATTTGGTACCGTGAGCCGCTTGATCCTGTCACTGGGGATAAGATTGGGAAAGCTATGAAGATTGCACCGGAAGACTTAATCAACATAGCTGGCCTTTCACAAGTACCTGATGGTGTGGCCTCATGGCATGTTGCAGTGAGCAAGTTCACTGATTCGCCATTGCTTTCAGCAGCATTACCTGTTTGGGATTCTTCTAATAAGAGTATTATGGCAGTTGTGGGTGTCACAACGGCGCTTTATAGCGTTGGACAGCTGATGAAGGAGCTAGTTGAGATGCACAGTGGTCACATGTACTTGACTTCACAAGAGGGTTACTTGCTTGCAACTTCCACAAATGCACCTCTGCTGACAAATTCAACAAAGCATCCAACGCTTAAGATGGCGGTTGATTGCGAAAATGAAGTGATCAAACTTGGTGCTGAGTGGTTGCAGAGAGCTTATGGAAACCATTCTCCTCCTAGTCATGAGGTTCATGTAGAAAATGCCAAGCTAGGCCACCAGCAATATTACATTGACTCTTTCTTCCTAAACTTGAAGAGACTTCCTTTGGTGGGGGTAATCATCATACCAAGAAAGTATATCATGGGGCAGGTTGATGAAAGAGCCTTCAAAACTTTGGTTATTCTAATATCTGCATCATTATGCATTCTAGTTATTGGATGTGTTTGCATTTTGATATTGACGAATGGAGTGTCGAAGGAAATGAAACTAAGAGCAGCATTGATAAGTCAGCTGGAAGCAAGAAGAAAGGCAGAGGCTTCAAGCAACTACAAAAGCCAATTTCTTGCGAACATGAGTCATGAATTAAGGACACCGATGGCAGCAGTAATTGGGTTGCTTGACATTCTTATATCTGATGACTGTCTCACAAATGAACAATACTCAACAGTTACTCAAATAAGAAAATGCTCAACTGCACTACTCCGTCTTCTTAACAACATCTTGGATCTTAGCAAGGTGGAATCAGGAAAACTAGTCCTAGAAGATGCAGAATTTGACTTGGGTCGTGAACTTGAAGGGCTTGTAGATATGTTTTCTGTCCAGTGCATTAACCACAATGTAGAGACTGTTTTAGATCTGTCTGATGAAATGCCAAAGGTAGTAAGGGGTGATTCTGCTAGGGTGGTTCAAATTTTTACAAATTTGATCAACAATTCAATAAAGTTTACTCCATCTGGTCACATCATTCTGCGAGGATGGTGCGAATACCCAAATTCTTGCAATGGTAGTCCAATTTTTCCACTTGAACAGAAGAAATCACGGTGTATACAAAAGGCTAGAGAGAAGCAAAATGCAAACAATGAAAAGAGAACAACTAAGAGAGATAACAAAGTGATACTTTGGTTTGAAGTTGATGACACAGGCTGTGGCATTGACCCAAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCAACTACTCGATTGCATGGAGGCACTGGTCTTGGTCTCTGCATTGTCAGAAACTTGGTCAATAAGATGGGCGGAGAAATCAAGGTTGTCAAAAAGGAGGGCCAAGGAACACTCATGAGATTATGCTTAGTTCTCAGTACACCTACTGATGTCACAGAGCAACATTATGCATTGGATTTTACTGACAATAGCTTAGTGGTACTTCTTGCACTGCATGGCAACATGAGTCGCTTGATTACTTCCAAGTGGTTACAGAAAAATGGGGTTTGCACTATAGAAGCATCTGAATGGAATGGACTAACACAGGTTTTGAGGGAACTCTTTCATGCAAGAAGTCCAGTCCATAATAACAATAACTTCGATGCACATTATCCAGTAACCGAGGGATTGAAGTCTAAATTACTCAGCATACAAGACATGAAGAAACCGGTTTTCGTCATTGTTGTGGACATTGGGCTACTTGACTTGAGCACAGACATATGGAAGGAACAGCTTAACTTCCTTCATAGATACTTTGGGAGAGCAAGGTTTGTGTGGATGCTAAATCATGACACATCCAATAACATAAAGATGGAGATTCGTCGGAAAGGGAATGTTTTGATGGTCAACAAACCCCTTTATAAAGCGAAAATGGTTCACATTTTGGAAGCAGTCATAAAGGAGAGAAATCTTGAGCTGCAAAAGAGAAATAATATGATTGGTCCAAGGACCACTACAAAAGAGGGCGAGTTGCATGAATTTCTTGAGATTGATTCTACTCATTTTGATGCTGGTAGCTCTGATGATTCGGACACTTCCGAAACGGTTGGTTCTAATCCTGTTAGTGTCGATGGAGATAAACAAATTGAATTGGTGGCTAGATCACCCGCATCATCAACATACAAGATCAATAACTGCTTAGTTGGATTAACCAATGAACATTTGGAAGATACTAACAATGCAAGGAAAGAAGAGTCATGTCAGAGTAGCCCCAGTTCTTCCAAACATGCCATTGAAGAAAGTGACCCTAAATCACTGTCCACTAAAGAACCATCTCAAGGTGGAGATTCTGAATGTGGCGAAACACATAGGGCCGCCGGCCCAAATAATAATGTGGTCAATGGAAAAAATTCTCTTGAAGGCCTGAGGATATTGCTTGCAGAAGATACTCCTGTGCTTCAAAGGGTAGCAACCATAATGCTTGAGAAAATGGGAGCTTCTGTTGTTGCTGTAGGTGATGGACAACAAGCAGTAGATGCTCTCCATTGCAAGCTAGGTGTTGATGACTGCAGAAGGGATTCTCTCCAGAAGGAAAGAAACATGAGATCTCAAACAGAGATTTTGACTTCACCATATGACTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGTTATGAAGCAACAAAAGCAATAAGGAAATCAGAAGTGGGAACAGGATTGCATATTCCAATTGTTGCCCTTACAGCTCATGCAATGTCATGTGATGAAGCCAAATGCCTTGAAGTTGGCATGGATGCTTACTTAACAAAGCCAATTGACTTCAAGCAAATGGTGTCCACCATACTTTCACTCACCAAAAGAAAAACATCATGA 3759 0.4134 MAEDRYETCSEGSACSQMGSNNKCKHVFDRLCGFAPSWNWNTTTTTTLPPPPSGRRIFHRDVEKEAFQYASSSHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTTKSLKTLAYDLRYELLQRPILRMWNILNSTAEITTAQVKLSQYVIRRYSNPVNQAEQVEQLYEAMRAITWALFSSKKALNSITINYKNGFVQAFHRDLKDNNTSYIYSDLSNYSMVANEMNSFSAHQAWNDKAIHGNKSAIWYREPLDPVTGDKIGKAMKIAPEDLINIAGLSQVPDGVASWHVAVSKFTDSPLLSAALPVWDSSNKSIMAVVGVTTALYSVGQLMKELVEMHSGHMYLTSQEGYLLATSTNAPLLTNSTKHPTLKMAVDCENEVIKLGAEWLQRAYGNHSPPSHEVHVENAKLGHQQYYIDSFFLNLKRLPLVGVIIIPRKYIMGQVDERAFKTLVILISASLCILVIGCVCILILTNGVSKEMKLRAALISQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDEMPKVVRGDSARVVQIFTNLINNSIKFTPSGHIILRGWCEYPNSCNGSPIFPLEQKKSRCIQKAREKQNANNEKRTTKRDNKVILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGEIKVVKKEGQGTLMRLCLVLSTPTDVTEQHYALDFTDNSLVVLLALHGNMSRLITSKWLQKNGVCTIEASEWNGLTQVLRELFHARSPVHNNNNFDAHYPVTEGLKSKLLSIQDMKKPVFVIVVDIGLLDLSTDIWKEQLNFLHRYFGRARFVWMLNHDTSNNIKMEIRRKGNVLMVNKPLYKAKMVHILEAVIKERNLELQKRNNMIGPRTTTKEGELHEFLEIDSTHFDAGSSDDSDTSETVGSNPVSVDGDKQIELVARSPASSTYKINNCLVGLTNEHLEDTNNARKEESCQSSPSSSKHAIEESDPKSLSTKEPSQGGDSECGETHRAAGPNNNVVNGKNSLEGLRILLAEDTPVLQRVATIMLEKMGASVVAVGDGQQAVDALHCKLGVDDCRRDSLQKERNMRSQTEILTSPYDLILMDCQMPKMDGYEATKAIRKSEVGTGLHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKQMVSTILSLTKRKTS 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00522 1252 MobiDBLite consensus disorder prediction 982 1008 - -
Arst5g00522 1252 MobiDBLite consensus disorder prediction 1037 1094 - -
Arst5g00522 1252 Pfam Response regulator receiver domain 1104 1243 IPR001789 GO:0000160
Arst5g00522 1252 CDD REC_hyHK_CKI1_RcsC-like 1104 1243 - -
Arst5g00522 1252 CDD HisKA 510 571 IPR003661 GO:0000155|GO:0007165
Arst5g00522 1252 ProSiteProfiles Histidine kinase domain profile. 516 774 IPR005467 -
Arst5g00522 1252 SMART HisKA_10 509 575 IPR003661 GO:0000155|GO:0007165
Arst5g00522 1252 Gene3D - 574 776 IPR036890 -
Arst5g00522 1252 Gene3D - 1084 1251 - -
Arst5g00522 1252 Pfam His Kinase A (phospho-acceptor) domain 510 575 IPR003661 GO:0000155|GO:0007165
Arst5g00522 1252 Coils Coil 667 687 - -
Arst5g00522 1252 SMART REC_2 1102 1243 IPR001789 GO:0000160
Arst5g00522 1252 PANTHER TWO-COMPONENT HISTIDINE KINASE 69 779 - -
Arst5g00522 1252 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 564 771 IPR036890 -
Arst5g00522 1252 SMART HKATPase_4 622 774 IPR003594 -
Arst5g00522 1252 FunFam Histidine kinase 1-like protein 497 576 - -
Arst5g00522 1252 Gene3D - 477 573 - -
Arst5g00522 1252 PRINTS Bacterial sensor protein C-terminal signature 717 727 IPR004358 GO:0016310|GO:0016772
Arst5g00522 1252 PRINTS Bacterial sensor protein C-terminal signature 699 713 IPR004358 GO:0016310|GO:0016772
Arst5g00522 1252 PRINTS Bacterial sensor protein C-terminal signature 734 752 IPR004358 GO:0016310|GO:0016772
Arst5g00522 1252 PRINTS Bacterial sensor protein C-terminal signature 758 771 IPR004358 GO:0016310|GO:0016772
Arst5g00522 1252 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 622 772 IPR003594 -
Arst5g00522 1252 SUPERFAMILY CheY-like 1100 1249 IPR011006 -
Arst5g00522 1252 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 497 576 IPR036097 GO:0000155|GO:0007165
Arst5g00522 1252 ProSiteProfiles Response regulatory domain profile. 1103 1247 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00522 Arst-Chr5 4350951 4357113 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00522 1 1248 Histidine Kinase Gene Family AT2G17820 63.133 0.0 1561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst5g00522 HATPase_c 3.2e-23 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00522 - - gmx:100807543 1976.06