Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00521 ATGGCAGAAGACAGATATGAAACCTGTTCTGAAGGTTCTGCATGTTCTCAAATGGGAAGCAATAATAAGTGCAAGCATGTGTTTGATAGATTATGCGGTTTTGCACCTTCATGGAATTGGAACACAACCACCACAACCACACTACCACCACCACCAAGTGGCAGAAGAATCTTCCATAGAGATGTTGAAAAAGAAGCATTCCAATATGCAAGTAGTAGCCATTGCCTCTCATCCTACTACAGTGTCTTTGTTGTTCGCCTAGCAATCATGGTGATGCTAGCAATCTTGATAGGGCTACTTACTATTCTAACATGGCATTTCACCAAGATTTACACAACAAAATCACTCAAAACCCTGGCATATGATCTGCGTTACGAGCTTCTTCAACGCCCAATCTTGAGGATGTGGAACATTCTGAATTCTACGGCCGAGATCACCACGGCTCAGGTGAAGCTTTCTCAGTATGTGATCAGGCGTTACAGCAACCCTGTTAATCAAGCAGAGCAAGTTGAGCAGCTGTATGAAGCAATGAGGGCTATAACATGGGCATTGTTTTCTAGTAAGAAAGCTCTGAACTCCATAACCATCAATTATAAGAATGGATTTGTCCAAGCTTTCCATAGAGATCTTAAGGATAACAACACATCTTACATCTATTCGGATCTCTCGAATTACTCTATGGTTGCTAATGAGATGAATTCCTTTTCGGCGCATCAGGCTTGGAATGATAAGGCCATTCATGGTAACAAATCAGCAATTTGGTACCGTGAGCCGCTTGATCCTGTCACTGGGGATAAGATTGGGAAAGCTATGAAGATTGCACCGGAAGACTTAATCAACATAGCTGGCCTTTCACAAGTACCTGATGGTGTGGCCTCATGGCATGTTGCAGTGAGCAAGTTCACTGATTCGCCATTGCTTTCAGCAGCATTACCTGTTTGGGATTCTTCTAATAAGAGTATTATGGCAGTTGTGGGTGTCACAACGGCGCTTTATAGCGTTGGACAGCTGATGAAGGAGCTAGTTGAGATGCACAGTGGTCACATGTACTTGACTTCACAAGAGGGTTACTTGCTTGCAACTTCCACAAATGCACCTCTGCTGACAAATTCAACAAAGCATCCAACGCTTAAGATGGCGGTTGATTGCGAAAATGAAGTGATCAAACTTGGTGCTGAGTGGTTGCAGAGAGCTTATGGAAACCATTCTCCTCCTAGTCATGAGGTTCATGTAGAAAATGCCAAGCTAGGCCACCAGCAATATTACATTGACTCTTTCTTCCTAAACTTGAAGAGACTTCCTTTGGTGGGGGTAATCATCATACCAAGAAAGTATATCATGGGGCAGGTTGATGAAAGAGCCTTCAAAACTTTGGTTATTCTAATATCTGCATCATTATGCATTCTAGTTATTGGATGTGTTTGCATTTTGATATTGACGAATGGAGTGTCGAAGGAAATGAAACTAAGAGCAGCATTGATAAGTCAGCTGGAAGCAAGAAGAAAGGCAGAGGCTTCAAGCAACTACAAAAGCCAATTTCTTGCGAACATGAGTCATGAATTAAGGACACCGATGGCAGCAGTAATTGGGTTGCTTGACATTCTTATATCTGATGACTGTCTCACAAATGAACAATACTCAACAGTTACTCAAATAAGAAAATGCTCAACTGCACTACTCCGTCTTCTTAACAACATCTTGGATCTTAGCAAGGTGGAATCAGGAAAACTAGTCCTAGAAGATGCAGAATTTGACTTGGGTCGTGAACTTGAAGGGCTTGTAGATATGTTTTCTGTCCAGTGCATTAACCACAATGTAGAGACTGTTTTAGATCTGTCTGCTGGTCACATCATTCTGCGAGGATGGTGCGAATACCCAAATTCTTGCAATGGTAGTCCAATTTTTCCACTTGAACAGAAGAAATCACGGTGTATACAAAAGGCTAGAGAGAAGCAAAATGCAAACAATGAAAAGAGAACAACTAAGAGAGATAACAAAGTGATACTTTGGTTTGAAGTTGATGACACAGGCTGTGGCATTGACCCAAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCAACTACTCGATTGCATGGAGGCACTGGTCTTGGTCTCTGCATTGTCAGAAACTTGGTCAATAAGATGGGCGGAGAAATCAAGGTTGTCAAAAAGGAGGGCCAAGGAACACTCATGAGATTATGCTTAGTTCTCAGTACACCTACTGATGTCACAGAGCAACATTATGCATTGGATTTTACTGACAATAGCTTAGTGGTACTTCTTGCACTGCATGGCAACATGAGTCGCTTGATTACTTCCAAGTGGTTACAGAAAAATGGGGTTTGCACTATAGAAGCATCTGAATGGAATGGACTAACACAGGTTTTGAGGGAACTCTTTCATGCAAGAAGTCCAGTCCATAATAACAATAACTTCGATGCACATTATCCAGTAACCGAGGGATTGAAGTCTAAATTACTCAGCATACAAGACATGAAGAAACCGGTTTTCGTCATTGTTGTGGACATTGGGCTACTTGACTTGAGCACAGACATATGGAAGGAACAGCTTAACTTCCTTCATAGATACTTTGGGAGAGCAAGGTTTGTGTGGATGCTAAATCATGACACATCCAATAACATAAAGATGGAGATTCGTCGGAAAGGGAATGTTTTGATGGTCAACAAACCCCTTTATAAAGCGAAAATGGTTCACATTTTGGAAGCAGTCATAAAGGAGAGAAATCTTGAGCTGCAAAAGAGAAATAATATGATTGGTCCAAGGACCACTACAAAAGAGGGCGAGTTGCATGAATTTCTTGAGATTGATTCTACTCATTTTGATGCTGGTAGCTCTGATGATTCGGACACTTCCGAAACGGTTGGTTCTAATCCTGTTAGTGTCGATGGAGATAAACAAATTGAATTGGTGGCTAGATCACCCGCATCATCAACATACAAGATCAATAACTGCTTAGTTGGATTAACCAATGAACATTTGGAAGATACTAACAATGCAAGGAAAGAAGAGTCATGTCAGAGTAGCCCCAGTTCTTCCAAACATGCCATTGAAGAAAGTGACCCTAAATCACTGTCCACTAAAGAACCATCTCAAGGTGGAGATTCTGAATGTGGCGAAACACATAGGGCCGCCGGCCCAAATAATAATGTGGTCAATGGAAAAAATTCTCTTGAAGGCCTGAGGATATTGCTTGCAGAAGATACTCCTGTGCTTCAAAGGGTAGCAACCATAATGCTTGAGAAAATGGGAGCTTCTGTTGTTGCTGTAGGTGATGGACAACAAGCAGTAGATGCTCTCCATTGCAAGCTAGGTGTTGATGACTGCAGAAGGGATTCTCTCCAGAAGGAAAGAAACATGAGATCTCAAACAGAGATTTTGACTTCACCATATGACTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGTTATGAAGCAACAAAAGCAATAAGGAAATCAGAAGTGGGAACAGGATTGCATATTCCAATTGTTGCCCTTACAGCTCATGCAATGTCATGTGATGAAGCCAAATGCCTTGAAGTTGGCATGGATGCTTACTTAACAAAGCCAATTGACTTCAAGCAAATGGTGTCCACCATACTTTCACTCACCAAAAGAAAAACATCATGA 3669 0.4154 MAEDRYETCSEGSACSQMGSNNKCKHVFDRLCGFAPSWNWNTTTTTTLPPPPSGRRIFHRDVEKEAFQYASSSHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTTKSLKTLAYDLRYELLQRPILRMWNILNSTAEITTAQVKLSQYVIRRYSNPVNQAEQVEQLYEAMRAITWALFSSKKALNSITINYKNGFVQAFHRDLKDNNTSYIYSDLSNYSMVANEMNSFSAHQAWNDKAIHGNKSAIWYREPLDPVTGDKIGKAMKIAPEDLINIAGLSQVPDGVASWHVAVSKFTDSPLLSAALPVWDSSNKSIMAVVGVTTALYSVGQLMKELVEMHSGHMYLTSQEGYLLATSTNAPLLTNSTKHPTLKMAVDCENEVIKLGAEWLQRAYGNHSPPSHEVHVENAKLGHQQYYIDSFFLNLKRLPLVGVIIIPRKYIMGQVDERAFKTLVILISASLCILVIGCVCILILTNGVSKEMKLRAALISQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSAGHIILRGWCEYPNSCNGSPIFPLEQKKSRCIQKAREKQNANNEKRTTKRDNKVILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGEIKVVKKEGQGTLMRLCLVLSTPTDVTEQHYALDFTDNSLVVLLALHGNMSRLITSKWLQKNGVCTIEASEWNGLTQVLRELFHARSPVHNNNNFDAHYPVTEGLKSKLLSIQDMKKPVFVIVVDIGLLDLSTDIWKEQLNFLHRYFGRARFVWMLNHDTSNNIKMEIRRKGNVLMVNKPLYKAKMVHILEAVIKERNLELQKRNNMIGPRTTTKEGELHEFLEIDSTHFDAGSSDDSDTSETVGSNPVSVDGDKQIELVARSPASSTYKINNCLVGLTNEHLEDTNNARKEESCQSSPSSSKHAIEESDPKSLSTKEPSQGGDSECGETHRAAGPNNNVVNGKNSLEGLRILLAEDTPVLQRVATIMLEKMGASVVAVGDGQQAVDALHCKLGVDDCRRDSLQKERNMRSQTEILTSPYDLILMDCQMPKMDGYEATKAIRKSEVGTGLHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKQMVSTILSLTKRKTS 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00521 1222 CDD HisKA 510 571 IPR003661 GO:0000155|GO:0007165
Arst5g00521 1222 ProSiteProfiles Response regulatory domain profile. 1073 1217 IPR001789 GO:0000160
Arst5g00521 1222 PRINTS Bacterial sensor protein C-terminal signature 669 683 IPR004358 GO:0016310|GO:0016772
Arst5g00521 1222 PRINTS Bacterial sensor protein C-terminal signature 704 722 IPR004358 GO:0016310|GO:0016772
Arst5g00521 1222 PRINTS Bacterial sensor protein C-terminal signature 728 741 IPR004358 GO:0016310|GO:0016772
Arst5g00521 1222 PRINTS Bacterial sensor protein C-terminal signature 687 697 IPR004358 GO:0016310|GO:0016772
Arst5g00521 1222 Gene3D - 636 746 IPR036890 -
Arst5g00521 1222 FunFam Histidine kinase 1-like protein 497 576 - -
Arst5g00521 1222 SMART HisKA_10 509 575 IPR003661 GO:0000155|GO:0007165
Arst5g00521 1222 SMART REC_2 1072 1213 IPR001789 GO:0000160
Arst5g00521 1222 MobiDBLite consensus disorder prediction 952 978 - -
Arst5g00521 1222 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 666 742 IPR003594 -
Arst5g00521 1222 PANTHER TWO-COMPONENT HISTIDINE KINASE 69 613 - -
Arst5g00521 1222 Pfam His Kinase A (phospho-acceptor) domain 510 575 IPR003661 GO:0000155|GO:0007165
Arst5g00521 1222 Coils Coil 637 657 - -
Arst5g00521 1222 SMART HKATPase_4 585 744 IPR003594 -
Arst5g00521 1222 Gene3D - 1054 1221 - -
Arst5g00521 1222 MobiDBLite consensus disorder prediction 1007 1064 - -
Arst5g00521 1222 SUPERFAMILY CheY-like 1070 1219 IPR011006 -
Arst5g00521 1222 ProSiteProfiles Histidine kinase domain profile. 516 744 IPR005467 -
Arst5g00521 1222 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 497 576 IPR036097 GO:0000155|GO:0007165
Arst5g00521 1222 CDD REC_hyHK_CKI1_RcsC-like 1074 1213 - -
Arst5g00521 1222 Pfam Response regulator receiver domain 1074 1213 IPR001789 GO:0000160
Arst5g00521 1222 Gene3D - 477 573 - -
Arst5g00521 1222 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 661 750 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00521 Arst-Chr5 4350951 4357113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00521 1 1218 Histidine Kinase Gene Family AT2G17820 61.313 0.0 1497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst5g00521 Response_reg 6e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00521 - - gmx:100807543 1904.03