Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00504 ATGGGAAGAAGTGATGTGGAGATTGGTTTGTCTCACCAAGATGCATTGATTGAACTTGGTTGCTGTTGTAAGAATGACCTTGCTTTAGTACACTATGCTTGTGCACTCAAGTGGTTTATTAATCATGGATCAACAATTTGTGAAATATGTGGACACATAGGCAATAATATCAGAATCTCTGACTTCAACAAGGTTGTTGGTTCTCTGAAAGAATATGAAGCCTTGAGGGAGAGAACTGTCAGTAGGGATCCTGGTCCTCATGTTCATGCAAATAATAATACTGGCATTGATCCTGACGCTGTGGCTGCTATCCGGAGGCAAAGGCTAAGTGAGATTGCATTATGGTTTTGTCCTCATAATACCAGTAGTATAAACAACAATAGCAATGCCGACACAGTTTCACAGGTTGCTTCTGAGCAGCCTTCAAATTTTGTTACTGAAGATGCTGGCCCTGCACAGAGTCCTGCAACCAAGTGGGCCGTGGAAGGCGCAGGGATCCTGCTTGCTACTGGCCTGCTTACAATCACCCTTGCGTGGCTGATAGCTCCTCGAGTTGGAAAGAAAACAGCCAAAAGTGGTCTTCACATCCTACTTGGAGGTGTTTGTGCTTTAACAGTGGTTGTTTTTTTTTCTGCTTTTTTGTGCTTATTAGAATCAAGTACGGACCTGCACGTTATTGGGCAATCTTGTTCGTTTTCTGGTTTCTTGTGTTTGCAATATGGGCTTCACGGACCTTAG 738 0.4336 MGRSDVEIGLSHQDALIELGCCCKNDLALVHYACALKWFINHGSTICEICGHIGNNIRISDFNKVVGSLKEYEALRERTVSRDPGPHVHANNNTGIDPDAVAAIRRQRLSEIALWFCPHNTSSINNNSNADTVSQVASEQPSNFVTEDAGPAQSPATKWAVEGAGILLATGLLTITLAWLIAPRVGKKTAKSGLHILLGGVCALTVVVFFSAFLCLLESSTDLHVIGQSCSFSGFLCLQYGLHGP 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00504 245 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 53 IPR013083 -
Arst5g00504 245 ProSiteProfiles Zinc finger RING-CH-type profile. 1 57 IPR011016 GO:0008270
Arst5g00504 245 Pfam RING-variant domain 16 50 IPR011016 GO:0008270
Arst5g00504 245 SMART ringv_2 12 51 IPR011016 GO:0008270
Arst5g00504 245 SUPERFAMILY RING/U-box 14 52 - -
Arst5g00504 245 PANTHER ZINC FINGER, RING-CH-TYPE 11 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00504 Arst-Chr5 4230540 4234887 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00504 5 210 C3H Transcription Factor Family AT5G08750 70.561 3.31e-96 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00504 - - adu:107487456 483.026