Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00491 ATGGAGTTTGTGCCAAATCCGTGTCCTCTGAGGTCCTCTCTGTTCGGTTCCTTCGGGGATCTCGTCGAGAGGATCAAGCAAATTGGAACCCTCGCTGTTTCTGCCGTCATTGGCAACATCTTCTCTGCGATCTTGACCTTCTGCTTCGCATTAGTTGGGACTTTGTTGGGGGCTATGACTGGAGCTTTGATAGGACAAGAGACTGAGAGTGGCTTCATTAGAGGTGCTGCTGTTGGTGCCATCTCAGGAGCTGTTTTCTCCATTGAAGTCTTTGAATCCTCTCTTGTTCTTTGGCAATCTGATGAGTCTGGAATTGGGTGTCTCTTGTACCTGATTGATGTTATTGCTAGCTTAGTGAGTGGGAGACTTGTTCGTGAGAGGATAGGTCCAGCAATGTTGAGTGCAGTTCAGAGTCAGATGGGTGCTGTTGAAACCGGTTTTGATGAAGTTCAAAACATCTTTGACACTGGTGGTTCAAAAGGCTTATCTGGAGATTTGGTCGAAAAAATCCCAATAATCAAAATTACTAGTGACAACAATGTTGATGCTTCTGGTGAAAGAGCGTCTTGTTCAGTTTGCCTCCAGGACTTTCAGCTGGGAGAGTCAGTTAGAAGCTTGCCCCATTGTCATCACATGTTTCACCTACCCTGCATAGACAAGTGGCTGTTTAGACATGGTTCTTGTCCATTATGCAGAAGGGATCTGTAA 708 0.4576 MEFVPNPCPLRSSLFGSFGDLVERIKQIGTLAVSAVIGNIFSAILTFCFALVGTLLGAMTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLVSGRLVRERIGPAMLSAVQSQMGAVETGFDEVQNIFDTGGSKGLSGDLVEKIPIIKITSDNNVDASGERASCSVCLQDFQLGESVRSLPHCHHMFHLPCIDKWLFRHGSCPLCRRDL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00491 235 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 21 234 IPR044523 -
Arst5g00491 235 FunFam NEP1-interacting protein-like 1 150 235 - -
Arst5g00491 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 235 IPR013083 -
Arst5g00491 235 SUPERFAMILY RING/U-box 189 235 - -
Arst5g00491 235 Pfam Ring finger domain 189 232 IPR001841 -
Arst5g00491 235 ProSiteProfiles Zinc finger RING-type profile. 190 232 IPR001841 -
Arst5g00491 235 SMART ring_2 190 231 IPR001841 -
Arst5g00491 235 CDD RING-H2_NIPL1-like 189 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00491 Arst-Chr5 4095394 4097655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00491 21 235 C3H Transcription Factor Family AT5G66070 77.209 2.46e-117 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00491 - - gmx:100807641 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00491 5 4095394 4097655 Arst1g01094 1 10947509 10950907 PCT