Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00443 ATGGCTTGCCTGAGCCGCCGCTGGGTCCCTAGTCCTGACATGCTCTCCGGAGAACACTTGTCCCACCACCACCACCACCATCATCACCACCGCATCCACGGGGGCGAAGGCGTTTTCGGTTCCGGCGACGGGGACGAGGGCTACTCCAAGAGCTGCACCTCTCTTCCTTCTTCTGCGTACCGGTTGGAGAAGGTTTTTCCCGTTTACGCCATGTGCGGGTCCGACCCGGAGTCTGCGTCCGTGTTAGACGGGTCTGACCCAGTTTGGGAGGCTGTTAAAGAAGAAGCGAAGTTGGAGGCAGAAAAGGAGCCAATCTTGAGCAGCTTCTTGTATGCAAGCATTCTATCGCATGATTGCTTGGAGCAAGCGTTGGCGTTTGTTATTGCAAACCGGCTCCAGAATCCTACCCTTTTGGCTACCCAGCTGATTGATATTTTTTGCAATGTGATCATGCATGACAAAGATATTCAACAATCCATTCGCCTTGATGTCCAGGCATTCAAAGATAGGGATCCTGCTTGTTTGTCATATTGCACAGCAATTTTGTATATGAAGGGTTACCATTCTCTGCAAGTTTATAGAGTAGCCCATGCATTATGGCACCAGGGACGCAAAGTTTTGGCCTTGGCTTTGCAAAGCCGAGTAAGTGAGGTTTTTGGAATTGATATTCATCCAGCTGCAAAAATTGGGGAGGGAATTTTATTAGATCATGGGACTGGCGTGGTTATTGGTGAAACTGCTGTTGTTGGAAACAGAGTTTCATTAATGCAAGGTGTAACATTAGGAGGCACGGGGAAGGGAACAGGTGATCGTCATCCCAAGGTAGGCGAAGGTGTGCTGATTGGTGCTAGTGCAACTATACTTGGGAATATAATAATTGGTGAAGGTTCAATGATAGCTGCTGGATCCCTGGTGTTAAAAGATGTCCCTCCCCACAGTGTTGTGGCAGGGATACCAGCAAATATTATTGGAGGTCTTCATGAGCATGACCCATCTTTAACCATGAAACATGATGCTACAAAGGATTTTTTTACAAAGTAG 1041 0.4793 MACLSRRWVPSPDMLSGEHLSHHHHHHHHHRIHGGEGVFGSGDGDEGYSKSCTSLPSSAYRLEKVFPVYAMCGSDPESASVLDGSDPVWEAVKEEAKLEAEKEPILSSFLYASILSHDCLEQALAFVIANRLQNPTLLATQLIDIFCNVIMHDKDIQQSIRLDVQAFKDRDPACLSYCTAILYMKGYHSLQVYRVAHALWHQGRKVLALALQSRVSEVFGIDIHPAAKIGEGILLDHGTGVVIGETAVVGNRVSLMQGVTLGGTGKGTGDRHPKVGEGVLIGASATILGNIIIGEGSMIAAGSLVLKDVPPHSVVAGIPANIIGGLHEHDPSLTMKHDATKDFFTK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00443 346 MobiDBLite consensus disorder prediction 18 40 - -
Arst5g00443 346 Gene3D Hexapeptide repeat proteins 222 345 - -
Arst5g00443 346 FunFam Serine acetyltransferase 222 343 - -
Arst5g00443 346 CDD LbH_SAT 219 319 IPR045304 -
Arst5g00443 346 SMART SATase_N_2_a 88 192 IPR010493 GO:0005737|GO:0006535|GO:0009001
Arst5g00443 346 Pfam Bacterial transferase hexapeptide (six repeats) 272 305 IPR001451 -
Arst5g00443 346 SUPERFAMILY Trimeric LpxA-like enzymes 85 336 IPR011004 -
Arst5g00443 346 FunFam Serine acetyltransferase 4 74 221 - -
Arst5g00443 346 NCBIfam serine O-acetyltransferase 160 320 IPR005881 GO:0005737|GO:0006535|GO:0009001
Arst5g00443 346 Gene3D serine acetyltransferase, domain 1 72 221 IPR042122 -
Arst5g00443 346 Pfam Serine acetyltransferase, N-terminal 88 191 IPR010493 GO:0005737|GO:0006535|GO:0009001
Arst5g00443 346 PANTHER SERINE ACETYLTRANSFERASE 72 345 - -
Arst5g00443 346 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 281 309 IPR018357 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00443 Arst-Chr5 3741538 3745641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00443 62 344 Miscellaneous Gene Families AT2G17640 75.088 2.31e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00443 K00640 - gmx:100775449 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00443 5 3741538 3745641 Arst5g00443 5 3741538 3745641 ECH
Arst5g00443 5 3741538 3745641 Arst1g00389 1 3541019 3542600 PCT