Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00434 ATGGAGAAGAACCAATCTACCTCTGCTTCCACCACCTCACTTCCATCCTTGTCCCTTTCAACTCCCGTTACTGAACCACCATCTTCACCACTTGTTGATCAACCCAACTTAAGCGGTGAAGAAGAAAAACTAATCATTCTCAAGACTCCTGAGAAAATTCTCACGGATCTCACAACAAATAATGATACTAATGGAGGAGGAAGCCTTCCACCATCACCACCACCACCATCACCACCGCAGATGATGGTAAGTGGGGCTATCGCAACTGCGGTGGGTGGTGGTGCAGTGGTTTTGGGTGGTAGTAACATTATTGGTCCTGTTAAAAGGCGAAAGGCTTCCGAAATTATTGATCCTCCAAGCGGTACACCAACATGTCCAATTTGTAGCAAAACATTTTCGAGTTGGAAGGGAGCCTTTGGACATATGAGAAAACACCCTGATCGCCAGTACCGTGGCTTCTTCAAGCCACCTACTTTCCCCTCTGCCTCTTCAAAGGCCGCCACCAATGCTAGTGGCAACCGTCACGAGGCTGCTGGCGAAGAAGGAAGCAGTGCTGATGCCTCCGGCGAGGTTGGAGAAGGTGGAGCTTCACCGGCGGTTCGCAACCTGCTGTTTGACCTCAACCTCCCAGTGGAGGGAGTAATTGAGGAAGAAGGGAAAATTATTTTAGGGTTTGATTTGAATGAGCCTGCGGCGGGTGAAGAAGAAGAAGAGGAGAAAGAAGACAAGCAATTTTAA 738 0.4864 MEKNQSTSASTTSLPSLSLSTPVTEPPSSPLVDQPNLSGEEEKLIILKTPEKILTDLTTNNDTNGGGSLPPSPPPPSPPQMMVSGAIATAVGGGAVVLGGSNIIGPVKRRKASEIIDPPSGTPTCPICSKTFSSWKGAFGHMRKHPDRQYRGFFKPPTFPSASSKAATNASGNRHEAAGEEGSSADASGEVGEGGASPAVRNLLFDLNLPVEGVIEEEGKIILGFDLNEPAAGEEEEEEKEDKQF 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00434 245 MobiDBLite consensus disorder prediction 230 245 - -
Arst5g00434 245 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 94 171 - -
Arst5g00434 245 MobiDBLite consensus disorder prediction 53 67 - -
Arst5g00434 245 MobiDBLite consensus disorder prediction 226 245 - -
Arst5g00434 245 MobiDBLite consensus disorder prediction 1 38 - -
Arst5g00434 245 MobiDBLite consensus disorder prediction 50 80 - -
Arst5g00434 245 MobiDBLite consensus disorder prediction 156 195 - -
Arst5g00434 245 ProSitePatterns Zinc finger C2H2 type domain signature. 125 145 IPR013087 -
Arst5g00434 245 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00434 Arst-Chr5 3671578 3674291 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00434 117 169 C2H2 Transcription Factor Family AT4G35280 45.455 4.65e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst5g00434 None None None