Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00431 ATGGAGGAAAAATATGATTCAATATCGGAAGTAAATCTCAAGAGGCTTTGGTGGAATTTTAAAGTATATATTGTTAGGATATGGGAAGAGCTTAGCAAATACAACAAACAAGAGACTTGGTCTATTGAAATGGTTTTGCAAGACAATAAGGGAGATAGGATTTACTCTACTGTGCCAAGAGCTTTGGTTCAGAAGTGGACTCCGATTCTGCACGAGTTTCAAATGTATACGATGACAAATTTCACAGTAGTTGACAACAAGACAAAGACAAAAAATGGTGTCAGTAGATATGTGTTAACATTTTCGCACAGAACTAAAGTTACTCATGTGGAGGTCCCTACATTCCCTTTACAAGCGTTTCGCTTTCGTTCATTTGTTGATCTCCAAAATGCCATGCTTGGAGATGCTGATATGTTTGATATTATTGGCGAGGTAGTGGGAAAGGAAGAACCAAGAGATCTGATAACTAGCAAGGGGAGGGAGACCAAGCGATTGGTGGTTATTCTCCAAGATTTAGACAACAACCGGATGAGCTGCACTTTGTTTGGTGACTTGGTGGACCAAATCGTACCTCACCTACAGGAGGAGAGGGTAGAACCACTCATCGTGGTTATGCAGTACTTTAAGGTATCCAGGTGGAATGGAAAAACATCTGTTCAAAGCAATTTTGCAATATCCAAGGTCCACATCAACCTGGATCTAGAAGAAGTCAATTTTTTCAAGACCAGAGTTGTTAGTGCTGGCCCATCAAGCGTATCCAGGATAAGCTATGTATCATCTCCTAGGGATTGGTCTGCAGCAGACGAGCTTAAGAATGGTTGTGTCGCTGTCAAAACAATAGAAGAAGCTCTTAATGTTGCTCAGGAAGGTCCTATATGGATCGCTGGCACCATTGTATCCATTAATGCTGGAAAGGCAGGTTGGTTTTATAAGGCATGTCGAAGGTGTCTAAAGAAGGTTGAAACCCCTGTTGGTACTAGATATGAATGTGCAAAGTGCGGCCACACACATGGAGTAGCTGCACTCAGGTACAAGGTTGAAGTTATGGCTCATTATGAGACAGGTAGCATTTGTTTGCTACTGTGGGACAGGGAGACCACACAGTTGTGCGGAAAGCCAGCCGAGTCAATCTTTAATGAGGAGCTTGCTCCAGACGATGAGTATCCACATACGCTGGACAACATGATGGTCAAAAAGGTGCTGTTTAAGCTTAATGTTAAGGCTGCAAATGTCAAGCAGTACGATCCAGTCTACACTGTGATGAAGGTGTGTGATGATGAGGATACCATATCGAAGAACCTCCCAACGACTTTAGTCGACAATAATACTCATGTAGTTAATGAGGCTGGGAACAATAATTCGTTCGATATACCAGGCATTGTTGTTAATCTTACAATTGACAATGATACTCACTTTAATATGGATTTTACTCAGGAACGTGTTAGTATCATCAAGTTCAAAACTCCAGCTAAAAGAGTTGCCAGTAGTGTAAAGGTTGCAACTATCAATCTCAAGCAGGATGAGGAGGAAGTTCATCACTCCACTAATAGATTTACTCGCAAGCTTTCTAAGAAGATGAAATCCCAACAGTCAGATATTGATAGTTAA 1608 0.4129 MEEKYDSISEVNLKRLWWNFKVYIVRIWEELSKYNKQETWSIEMVLQDNKGDRIYSTVPRALVQKWTPILHEFQMYTMTNFTVVDNKTKTKNGVSRYVLTFSHRTKVTHVEVPTFPLQAFRFRSFVDLQNAMLGDADMFDIIGEVVGKEEPRDLITSKGRETKRLVVILQDLDNNRMSCTLFGDLVDQIVPHLQEERVEPLIVVMQYFKVSRWNGKTSVQSNFAISKVHINLDLEEVNFFKTRVVSAGPSSVSRISYVSSPRDWSAADELKNGCVAVKTIEEALNVAQEGPIWIAGTIVSINAGKAGWFYKACRRCLKKVETPVGTRYECAKCGHTHGVAALRYKVEVMAHYETGSICLLLWDRETTQLCGKPAESIFNEELAPDDEYPHTLDNMMVKKVLFKLNVKAANVKQYDPVYTVMKVCDDEDTISKNLPTTLVDNNTHVVNEAGNNNSFDIPGIVVNLTIDNDTHFNMDFTQERVSIIKFKTPAKRVASSVKVATINLKQDEEEVHHSTNRFTRKLSKKMKSQQSDIDS 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00431 535 MobiDBLite consensus disorder prediction 513 535 - -
Arst5g00431 535 SUPERFAMILY Nucleic acid-binding proteins 4 110 IPR012340 -
Arst5g00431 535 SUPERFAMILY Nucleic acid-binding proteins 277 425 IPR012340 -
Arst5g00431 535 Gene3D - 268 433 IPR012340 -
Arst5g00431 535 SUPERFAMILY Nucleic acid-binding proteins 121 243 IPR012340 -
Arst5g00431 535 CDD RPA1_DBD_B_like 140 244 - -
Arst5g00431 535 Gene3D - 3 109 IPR012340 -
Arst5g00431 535 Gene3D - 114 251 IPR012340 -
Arst5g00431 535 Pfam Domain of unknown function DUF223 43 116 IPR003871 -
Arst5g00431 535 CDD RPA1_DBD_A_like 21 107 - -
Arst5g00431 535 CDD RPA1_DBD_C 277 423 IPR047192 -
Arst5g00431 535 PANTHER OS03G0429900 PROTEIN 7 424 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Arst5g00431 535 Pfam Replication factor-A C terminal domain 295 423 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00431 Arst-Chr5 3651127 3653920 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00431 114 378 Core DNA Replication Machinery Family AT2G06510 24.910 6.42e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00431 - - aip:107630584 567