Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00427 ATGGGTAATTGTTTTGGTTCACCACCTACGAATGAATCACACTCTACCATCAATAAACCTCGTCATTATTCAGGTTCGTGGAGTAGTGGTGGCGATGAGAGCAAGAAGGTGGCATCATCAACAATTGATGATGGAGGAACAAGCAGCCAAGGAATTAGTAGTCATCAGTTTTCGGCATCGGAGACTTCGAGTTTCGGTGGAAGCTTCGGTGTATCGATCATAACTCACAGTGGCCAGATTCTTGAGACTCCGAATCTGAAAGTGTTCAGTTTCATGGAATTGAGAGTGGCAACGAAGAACTTCAAGCCGGATACATTGCTGGGCGAAGGTGGATTCGGAAAGGTTTACAAAGGTTGGTTGGATCAGAGAACGCTTTCTCCGGCCAAAGCGGGTTCCGGCATGGTCGTCGCCGTCAAGAGACTCAACACCGAGAGCGTTCAGGGATTTCAAGAGTGGAAGTCAGAAGTCAGCTTCTTAGGAAGGATTTCTCACCCAAATCTTGTTAAGCTTTTGGGTTATTGTAGAGAAGCTGATGAACTTCTCCTTGTTTACGAGTTTATGCCTAAGGGAAGCTTGGAGAGCCATCTCTTCAGAAGAAACTCTAATACAACAGAACCAATTTCTTGGAACACTCGTCTCAAAATAGCCATTGATGCTGCTAGAGGCTTGGCCTTCTTGCATACTTCAGAAAAGCAAGTTATATATAGAGATTTTAAGGCCTCCAATATATTATTAGATGGGGATTACAATGCAAAGATTTCCGATTTTGGATTAGCTAAATTGGGGCCTGCTGGAGGAGAATCACATGTGAGTACCAGAATCATGGGCACCTGTGGTTATGCTGCTCCAGAATACATAGCAACTGGTCATTTGTATGTGAAAAGTGATGTGTACGGATTTGGTGTAGTGCTGCTTGAAATGCTGACAGGGCTGAGAGCACTTGACACAAAGAGACCAACAAATCAGCAGAACCTTGTTGAATGGAAGAGGCATTCACTCTCTGATAAGAAGAACATTAATAAGAACATCATGGATCCAAGAATTGAGGATCAATACTCAGTCAAAGCTGCAACACAAGCAGCTCAACTTACCCTTAAATGCCTTGAACCTGTCCCCAAGAACCGCCCTTCTATGAATGAAGTCTTGAAGTCTTTGGAATCCATTGCTGCTATCAAACATAGAACCTCCAAGAAGCCTTCCAAGAAATTAAACACCATGCATAGTGCTAATTAA 1233 0.4339 MGNCFGSPPTNESHSTINKPRHYSGSWSSGGDESKKVASSTIDDGGTSSQGISSHQFSASETSSFGGSFGVSIITHSGQILETPNLKVFSFMELRVATKNFKPDTLLGEGGFGKVYKGWLDQRTLSPAKAGSGMVVAVKRLNTESVQGFQEWKSEVSFLGRISHPNLVKLLGYCREADELLLVYEFMPKGSLESHLFRRNSNTTEPISWNTRLKIAIDAARGLAFLHTSEKQVIYRDFKASNILLDGDYNAKISDFGLAKLGPAGGESHVSTRIMGTCGYAAPEYIATGHLYVKSDVYGFGVVLLEMLTGLRALDTKRPTNQQNLVEWKRHSLSDKKNINKNIMDPRIEDQYSVKAATQAAQLTLKCLEPVPKNRPSMNEVLKSLESIAAIKHRTSKKPSKKLNTMHSAN 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00427 410 ProSitePatterns Protein kinases ATP-binding region signature. 107 139 IPR017441 GO:0005524
Arst5g00427 410 SUPERFAMILY Protein kinase-like (PK-like) 85 391 IPR011009 -
Arst5g00427 410 CDD STKc_IRAK 107 388 - -
Arst5g00427 410 FunFam Serine/threonine-protein kinase BIK1 70 186 - -
Arst5g00427 410 Gene3D Phosphorylase Kinase; domain 1 72 186 - -
Arst5g00427 410 PANTHER OS01G0588500 PROTEIN-RELATED 49 388 - -
Arst5g00427 410 MobiDBLite consensus disorder prediction 1 59 - -
Arst5g00427 410 ProSiteProfiles Protein kinase domain profile. 101 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00427 410 Gene3D Transferase(Phosphotransferase) domain 1 187 409 - -
Arst5g00427 410 FunFam Serine/threonine-protein kinase PBS1 187 403 - -
Arst5g00427 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Arst5g00427 410 Pfam Protein tyrosine and serine/threonine kinase 105 385 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00427 Arst-Chr5 3618716 3624597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00427 87 385 Glycoside Hydrolase AT3G07070 49.333 1.33e-97 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Arst5g00427 PK_Tyr_Ser-Thr 8.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00427 - - qsa:O6P43_033520 518.079