Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00426 ATGGATTCCTCACTCAGCATCCTCTTAGTCTTCAACAACACCATCCAACCAGAGTTGTTCAGGAGCGTGCATGTATATTGCAGAGAATTATTGGATGGGGACGAAAGGGAGGAAGAAGAAGTGGTAGTTGAGAGGGAGTTTGTGTTATCTGAGAGTGGCTTCTACGTGGAAATGAAGTGCACTCCAATTCTCACATCACTCAAGCTTTGTGTTGATGATGTTTGTGAAGGTTACAAGAATGGTGTGTGGCTTTGTGTCTTTGCGTTTCATGCTGATCACACGCCTCAATTCACACACATTCCTTCAATTTTGTTGTTCGCCAGAAACTCAAAACTCAAGGCAATTCCCAACTTGCTTAATGATCTCCAGATTATATACAAGCTGGAATTGAAAGCAGAAGTCAAAGATGATCTGCTAGATTCTTCAAAGGAAGAATCACAGGGAAATAGCGATGGTCACCAATCACCACAGAAAGTCTTGCCAGTATTTAATCAGGATCTAAATTGCCTTCCTTTGGATGAAGACACAACTGAGTTGATCGACAAGAAGACAAATGTTGAAAGCTTACCAGGTTTTGGAGCAAAGAAAAGGAGGGCGCAAAGCGACCACATAGCGAAAATTGCTTTACCAGATTTGGTCAAGTACTTTGATGTGCCAATTGTAGAAGCTTCAAGAAATCTGAATATTGGGCTTACAGTTCTCAAGAGAAAGTGCAGAGAATTTGGTATTCCCCGCTGGCCACATAGGAAGATAAAATCACTTGACAATCTCATTCATGATCTTGAGCCTTGTACTCCCTACAAAGTTAAAATTTGGAGTCCACACTACGGAACATTCCCTAACTTATAG 849 0.4134 MDSSLSILLVFNNTIQPELFRSVHVYCRELLDGDEREEEEVVVEREFVLSESGFYVEMKCTPILTSLKLCVDDVCEGYKNGVWLCVFAFHADHTPQFTHIPSILLFARNSKLKAIPNLLNDLQIIYKLELKAEVKDDLLDSSKEESQGNSDGHQSPQKVLPVFNQDLNCLPLDEDTTELIDKKTNVESLPGFGAKKRRAQSDHIAKIALPDLVKYFDVPIVEASRNLNIGLTVLKRKCREFGIPRWPHRKIKSLDNLIHDLEPCTPYKVKIWSPHYGTFPNL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00426 282 ProSiteProfiles RWP-RK domain profile. 189 275 IPR003035 -
Arst5g00426 282 PANTHER PROTEIN RKD4 96 260 IPR044607 GO:0003700
Arst5g00426 282 Pfam RWP-RK domain 207 254 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00426 Arst-Chr5 3610070 3614246 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00426 15 262 AtRKD Transcription Factor Family AT4G35590 42.586 2.66e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Arst5g00426 RWP-RK 4.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00426 - - gmx:113001653 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00426 5 3610070 3614246 Arst5g00426 5 3610070 3614246 ECH