Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00425 ATGGATTCCTCACTCAGCATCCTCTTAGTCTTCAACAACACCATCCAACCAGAGTTGTTCAGGAGCGTGCATGTATATTGCAGAGAATTATTGGATGGGGACGAAAGGGAGGAAGAAGAAGTGGTAGTTGAGAGGGAGTTTGTGTTATCTGAGAGTGGCTTCTACGTGGAAATGAAGTGCACTCCAATTCTCACATCACTCAAGCTTTGTGTTGATGATGTTTGTGAAGGTTACAAGAATGGTGTGTGGCTTTGTGTCTTTGCGTTTCATGCTGATCACACGCCTCAATTCACACACATTCCTTCAATTTTGTTGTTCGCCAGAAACTCAAAACTCAAGGCAATTCCCAACTTGCTTAATGATCTCCAGATTATATACAAGCTGGAATTGAAAGCAGAAGTCAAAGATGATCTGCTAGATTCTTCAAAGGAAGAATCACAGGGAAATAGCGATGGTCACCAATCACCACAGAAAGTCTTGCCAGTATTTAATCAGGATCTAAATTGCCTTCCTTTGGATGAAGACACAACTGAGTTGATCGACAAGAAGACAAATGTTGAAAGCTTACCAGGTTTTGGAGCAAAGAAAAGGAGGGCGCAAAGCGACCACATAGCGAAAATTGCTTTACCAGATTTGGTCAAGTACTTTGATGTGCCAATTGTAGAAGCTTCAAGAAATCTGAATATTGGGCTTACAGTTCTCAAGAGAAAGTGCAGAGAATTTGGTATTCCCCGCTGGCCACATAGGAAGATAAAATCACTTGACAATCTCATTCATGATCTTGAGGAAGAGGCGAAACACCAAGAACCAAAGGACAAGGTGTCAGCGATGGCGATGGTGAGGAGGCAAAGGATGTTGGAATGCGAAAAGGAAAACATGGAGAAGAAGCCCTTCATGGACATACAAACTGAGACCAAGAGATTCAGGCAAGATGTGTTCAAGAGAAGGCACAGAGCTAGAGCTGTTGAAAAACAAAGTTCTGCAGTTTAA 990 0.4232 MDSSLSILLVFNNTIQPELFRSVHVYCRELLDGDEREEEEVVVEREFVLSESGFYVEMKCTPILTSLKLCVDDVCEGYKNGVWLCVFAFHADHTPQFTHIPSILLFARNSKLKAIPNLLNDLQIIYKLELKAEVKDDLLDSSKEESQGNSDGHQSPQKVLPVFNQDLNCLPLDEDTTELIDKKTNVESLPGFGAKKRRAQSDHIAKIALPDLVKYFDVPIVEASRNLNIGLTVLKRKCREFGIPRWPHRKIKSLDNLIHDLEEEAKHQEPKDKVSAMAMVRRQRMLECEKENMEKKPFMDIQTETKRFRQDVFKRRHRARAVEKQSSAV 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00425 329 ProSiteProfiles RWP-RK domain profile. 189 274 IPR003035 -
Arst5g00425 329 PANTHER PROTEIN RKD4 97 323 IPR044607 GO:0003700
Arst5g00425 329 Pfam RWP-RK domain 207 254 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00425 Arst-Chr5 3610070 3614494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00425 15 329 AtRKD Transcription Factor Family AT4G35590 44.411 1.85e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Arst5g00425 RWP-RK 5.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00425 - - gmx:113001653 421.779