Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00419 ATGGGAGGTTTATTACACTTGTTTGAGTTCAATCAGGGGAGGATGGCCAAGAAAGTTCATGCTCATAAAAGGCATCAGGGTGGCCTGGAAGCTCCCCGGAATAGCCTGGATCTGCAATTAGAGACGTCTCAGTACCACTGTCCGGAAGGAGAATTACCAATAGCATATAACTATCAAGTAGAAGAAGACTGGTCAGAGAACATTCACTGTGCAAATATGGGTTCGATGAAAAAACTTATCAATGAGGAGCTATCCAAACGCTCAACCACCAAGCAAAATGCACCAAGCCTCGTGGCAAGGTTGATGGGGATTGATACGATGCCACCAGACACAAAATCTGTTGTTCCATTAGAAAGAACTAGTGAAATTATGGGGACAAAGTTTTCAAAGAGGGAAATGAATGGAAGGGATTCGGTTAGTCGGGGCTATTATAATTTCAATTCTTCTAGTGAAATGGAATTAGATTCATTTTATGGAGGCATAGATGATGATGATGGGTGGAGCCAAAGTTTCGGAAAACCAAGGCCACGGGAACATCCTCAAGAAGAGGAACTCCAGAAATTTAAGAAAGAGTTTGAAGCGTATCAAGCAACACGGTTTCTGGAGTGCTCAAAGGTTGCCGAAATCGATAGTATTCCTAGACGATTACTTCCTCAAGAGAACCTGAACAAGGAAAATTTGACACATGATACAAGTTCACACAGAACAACCATGGAGAAACTTGCAGAACTTGATAGCCACTTGCTCAAATCAGAGCTACCCGACATTGGTGGTCCCGAATATGGTGATGATGTGATGGAGTTAATCCCAGCTATGCAAAAGAAATCCTTTCCTTCAAGGAGCAGAACACTAAGTAGAGATTTTGAGGAGTCTTTGATAATGAAATCTTATCACAAATTTGATAGATCTTCTTCTCCGACTCGGATAGTTGTCTTGAAGCCTGGCCTTGATAGCATTTGCAACCATGAAGACAGTTGGACTGGTTCATCTGGCACTTTACAAGGCAGAAACAGTATAGCAGATTTTCTTGAGGAGGTCAAAGAGCGATTGAAAAGTGAACTACAAGGGAGAACTGTCAAGAAGGGTTCTGTGGTTCGAGGGAGTGGAATTGAGACACGTTACAATGAAAAGCCAGCTGATCCTAAACTAATAGCCCAGCACATAGCAAAACAGGTCAGAGAAAGTGCAACTAGAGACGTCGAAGCAAATTTATTCCGGTCAGAATCAACAAGGTCATATAAAAATGATATGCTGTTCAACGGACCAAGCTCCCCAGAATTTATCAACAGAGACACAAGGAGGTTCTCGTCGGAGAGGCTAAGAAATATTGGGAAAAGCGAAATGCGCATTGACCTTCCTGAGGTGACTTCTAGGAACTTGGCGCCACATGCTTTAGTCAATCACAGAGTTAGGCAAAAGCAAACAGAAGATAAGTGTTCAAATGGCACAAGCCATTGGAAAGTTTCAAAAGGGGAAAATGAAATACAAACAGGATCTTTCAGACATGATCCAGATGACAATGTGTTGTTCCAAAGGGACTTGTCCCCAAGAAACCTTGTAAGGTCCTTGTCTGCTCCTGTATCAGGATCAGGAACATCGTTTGGGAAGCTACTTCTAGAGGATCGCCACGTTTTAACTGGTGCACAAATTCGAAGGAAGCTTGAAGCTGTTGAAACTATTTCTGTTGATGTTAAAAAACAGAAAAAGGATAGATTCAATATTAAAGAGAAAGTCTCTCATTTTAGATATAGCCTTGGTCTAAGAGGGAGGCTTTTCGGAAAAAGGATTCAATCAATGGTAGAATCACATGGCAATGAATATGGTTCCATGGTGAGAGATGTCACCAGTGGACCGACAGTTCTATTGACCTACGGCGAGAGGCATGAGAACTCCACTGAGGTACCTCCTAGTCCTGCATCAGTGTGCAGCAGTGTTCATGAAGAATTTTGGAAGCGAGCTGAATACTTAAGTCCACTATCAACTCCAGACGTTTCTTCGAGGGACGACAACATTGTTCCGCAGGTTTTCAGAGATATCAGCTCTGGTTTGAGTGAGCTAAGGAGACAGCTCAATCAACTCGAGTCCAATGGTTCTGACGACATCACAACAAAACAGGAGCCTCTTGAATCCGAGATAGTTCAACTAGAGGATCCAGCAGAATCTTTCATAAGAGATCTACTAGTTGCCTCTGGTCTGTACTTTGGATCATGGGATAAATCTTTACTAAGAGGAGACTCATTGGCAAAGCCTATCGGAAACTCGGTATTCAAAGAAGTGGAAGCATCTGGCGAGAGATCAATCAATGAGAATGACGAAGGTTCTATAAAGGATCGGAATGAGAATATGATAAACAAGAGGGTCTTGCTTGATTTGTTGAACGAGGCACTTTCGGTTGTTCTTGGACCATCTTTGACATTATCAAGATTCAGAAGGAAAGTAAGCAACACTTCCATGATGATGGCACCACCTTGTGGAAAAGAATTGTTGAAATCAGTGTGGGAAATCATCAGTGCTTCTTTGTATCCGCAATGTGATGAAATATATCCTTATTCTCTTGATGATTTGGTGGCTCAACATTTGGGGTCAGTCCCTTGGTCTGGATTAGTATCTGAAGAGATCAATGTATTGGAAAGAGATATAGAATGTATGATAACCAATGATCTGGTTGAAGAACTCACAAAAGACATGCTCCTTTTTCGGCCTCAATCGAACCACCAGCATCCGAGTCTTATTACCAGGAATTCGACTAACTCGAGCTGA 2760 0.4217 MGGLLHLFEFNQGRMAKKVHAHKRHQGGLEAPRNSLDLQLETSQYHCPEGELPIAYNYQVEEDWSENIHCANMGSMKKLINEELSKRSTTKQNAPSLVARLMGIDTMPPDTKSVVPLERTSEIMGTKFSKREMNGRDSVSRGYYNFNSSSEMELDSFYGGIDDDDGWSQSFGKPRPREHPQEEELQKFKKEFEAYQATRFLECSKVAEIDSIPRRLLPQENLNKENLTHDTSSHRTTMEKLAELDSHLLKSELPDIGGPEYGDDVMELIPAMQKKSFPSRSRTLSRDFEESLIMKSYHKFDRSSSPTRIVVLKPGLDSICNHEDSWTGSSGTLQGRNSIADFLEEVKERLKSELQGRTVKKGSVVRGSGIETRYNEKPADPKLIAQHIAKQVRESATRDVEANLFRSESTRSYKNDMLFNGPSSPEFINRDTRRFSSERLRNIGKSEMRIDLPEVTSRNLAPHALVNHRVRQKQTEDKCSNGTSHWKVSKGENEIQTGSFRHDPDDNVLFQRDLSPRNLVRSLSAPVSGSGTSFGKLLLEDRHVLTGAQIRRKLEAVETISVDVKKQKKDRFNIKEKVSHFRYSLGLRGRLFGKRIQSMVESHGNEYGSMVRDVTSGPTVLLTYGERHENSTEVPPSPASVCSSVHEEFWKRAEYLSPLSTPDVSSRDDNIVPQVFRDISSGLSELRRQLNQLESNGSDDITTKQEPLESEIVQLEDPAESFIRDLLVASGLYFGSWDKSLLRGDSLAKPIGNSVFKEVEASGERSINENDEGSIKDRNENMINKRVLLDLLNEALSVVLGPSLTLSRFRRKVSNTSMMMAPPCGKELLKSVWEIISASLYPQCDEIYPYSLDDLVAQHLGSVPWSGLVSEEINVLERDIECMITNDLVEELTKDMLLFRPQSNHQHPSLITRNSTNSS 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00419 919 Coils Coil 676 696 - -
Arst5g00419 919 Pfam Domain of unknown function (DUF4378) 721 891 IPR025486 -
Arst5g00419 919 MobiDBLite consensus disorder prediction 168 184 - -
Arst5g00419 919 Pfam DUF761-associated sequence motif 93 110 IPR032795 -
Arst5g00419 919 MobiDBLite consensus disorder prediction 165 184 - -
Arst5g00419 919 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 897 - -
Arst5g00419 919 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 897 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00419 Arst-Chr5 3545609 3550606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00419 76 896 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 41.775 1.74e-158 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00419 - - adu:107487403 1818.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00419 5 3545609 3550606 Arst5g00419 5 3545609 3550606 ECH
Arst5g00419 5 3545609 3550606 Arst1g01163 1 11412831 11416225 PCT