Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00402 ATGGTTAAAGTTTGGTTCTTGGTGTTGATTATTCTCTCCAATGGATTCTATTCAAATGGGGCAGACATGCAAAATTCCACAGTACCTGAGGTTGTAAATATTGGGGCTCTCTTCTCTTTCAATGGCTCTTTTGGTAGAAGTGTAAAATTTGCTATAAAGGCTGCAGTTGATGATGTAAATTCTGATCCATCAATTCTTGGTAAAACAAAGCTGAATCTCATACTGCAAGAGGATACAAAATACAGAGGTTTTCTTAGCATTTCTGAGGTTTTGCAGGTTGCAACGAGACATACTGTGGCTATAATTGGTCCCCAGTCATCTGTAACAGCTCATGTCATAGCTCATATTGCAAATGAGCTCCAAGTTCCTCTGCTATCGTTTTCGGCTTTAGACCCTACCCTTCATTCACTTCAGTTTCCATTCTTTATTAGAACAGGTCATAGTGATCTTTATGTGATGACTGCAATAGCAGACTTTGTTGATCACTTTGGGTGGAAAGATGTTATTGCTTTCTATGTGGATGATGATAATGGGAGGAATGGAATTGGAGCTCTAGGCGACAAGCTCGCCGATAGGCGTTGCAGGATCTCATTTAAGGCAGCTGTGAGTCCTGATGCAACTGATGAGGAGATTACTGATGTGCTTGTTCAGGTGGCTTTGGCAGAGTCAAGAGTTATAGTTCTTCACCTCAACACTGTTTGGAAACTCAAGGTTTTCAATCTTGCAAAGAATCTTGGGATGATGGAAACTGGTTATGTCTGGATAGGTACTACTTTTCTTTCTGCTGTGCTTGATATGGAAAGTCCCTTGTCTTCAGATAAAATGGATGATATTCAAGGAGTTATTACATTTCGTGTTTACACACCGGATTCTGAACTCAAAAGAAGGTTTGTTTCTAAGTGGAAGAATTTGACTCAAGCTGATAGTGCTAATGGAGGCCCTCTTGGTTTTACTCCTCTAATTCTATATGCTTATGATACTGTTTATGCTCTTGCACATGCACTTGATTCGTTTTTCAAACAAGGGAACAGAATCACTTTCTCAAATGATTCAAAGTTATCAGTGTTACAAGGTGACAACTTGCATCTTGATGCCTTGAACATCTTCAATGAAGGACCTTCCTTGCGGCGAAGCATTTATGGGGTTAACATGACCGGTGTGACAGGTCCATTCAGCTATACATCTGATGAAAATCTTGCCAATCCTGCATTTGAGATCATCAATGTAATTGGAACAGGCTCTAGGAAGATTGGTTATTGGTCTAACTACTCTGGATTATCAGTTCTTCCTCCAGATACTCTTTATTCCAAGCCTGTTAATAATTCCAGGGAAAGTAAAACTTTACTTCCGGTGATTTGGCCTGGAGACACTGATCAAAAGCCCCGTGGTTGGGTTTTTCCCAACAGTGGAAGGCTATTAAAGATTGGAGTACCAAGAAGGGTTAATTACCATGAATTTGTGTCACCGGTAAAAGGCACTGATATGTTTCAGGGATTCTGCATTGATGTGTTTCTTGCTGCAGTGGATTTGTTGCCTTATGCTGTTCCCTATAAGTTTGTCCCCTTTGGCGACGGTCGCATCAATCCTAGCGCCACAGACCTTGTCCGTCGGATCACAACCGGTGAATTTGATGGTGCTGTTGGTGACATTGCCATTACTACAGAAAGAACAAGGATGGTGGATTTTACACAGCCTTATATTGAGTCTGGTCTAGTTGTAGTTGCACCAGTTAGGAAGGCAGAATCCAATGCTTGGGCGTTTTTGTCGCCGTTTACGCCCATGATGTGGGCTGTCACAGCTATGTTTTTCTTGTTTGTGGGAGCTGTTGTTTGGATATTGGAGCATAGAGTTAATGATGACTTTAGGGGACCTCCCAAGAAACAAGTAGTTACTATCTTATGGTTCAGTTTTTCAACTATGTTCTACTCACACAGGGAAAATACAGTTAGCACTCTCGGTCGCTTAGTGCTGATTATATGGTTATTTGTAGTTCTTATAGTTAACTCGAGTTACACAGCGAGTCTAACCTCAATCCTCACAGTGCAACAACTTTATTCACCCATCAAAGGCATTGAAAGTTTGGTAAATAGCAAGGATCCTATTGGTTACACTCAAGGTTCTTTCGCGAAAAATTATTTGATTCAGGAAATTGGCATTGCTGAATCGAGGCTGGTTCCTTTGAACACACCGGAGGAAGCTGCTAATGCTCTTAAAAAGGGTCCCCATGGTGGTGGTGTCTCTGCATACATTGATGAACGTTCCTACATAGAGCTCTTCCTTTCAAGCCGGTGTGATTTCACTGTTATTGGTCAAGAGTTCACTAGAGATGGTTGGGGATTTGCCTTTCCGCGAGACTCGCCTTTAGCAGTAGACCTGTCAACAGCAATTCTGGAAATGGCAGAGAATGGAGACCTACAAAGGATCCATGACAAGTGGCTTCTGCGCAGCGCCTGCTTGTCGCAGGGGACGAAACTGGAAGTGGAAAGACTAAACCTTCAAAGCTTCTGGGGCCTCTATCTGCTATGTGGCTTTGCCTGCTTCATTGCTCTCTTGATATATCTCATACAAGTGACTAGGCAGTACTTCAAGCATGGCTCTGATGAACTTGACCCTTCAGAGCAGGGCTCATCTTCAGGATCTGCGCGCCTTCGGAGCTTCCTTTCATTTGTGGATGAAAAGGAGGAGACAGTTAAGAGCCGCTCCAAGAGAAGGCAAATGGAGAAGATCTCATACAGAAGCAGCATTGGATCATCTATGAGCTCAAACAAAGACTATGCTCAATCTTCTCCATACAAAAATTTTTGTGCTAATGATGCTCAATCTTCTCCACACACAACTGATTGTGCTAATGAAGCATGA 2859 0.4229 MVKVWFLVLIILSNGFYSNGADMQNSTVPEVVNIGALFSFNGSFGRSVKFAIKAAVDDVNSDPSILGKTKLNLILQEDTKYRGFLSISEVLQVATRHTVAIIGPQSSVTAHVIAHIANELQVPLLSFSALDPTLHSLQFPFFIRTGHSDLYVMTAIADFVDHFGWKDVIAFYVDDDNGRNGIGALGDKLADRRCRISFKAAVSPDATDEEITDVLVQVALAESRVIVLHLNTVWKLKVFNLAKNLGMMETGYVWIGTTFLSAVLDMESPLSSDKMDDIQGVITFRVYTPDSELKRRFVSKWKNLTQADSANGGPLGFTPLILYAYDTVYALAHALDSFFKQGNRITFSNDSKLSVLQGDNLHLDALNIFNEGPSLRRSIYGVNMTGVTGPFSYTSDENLANPAFEIINVIGTGSRKIGYWSNYSGLSVLPPDTLYSKPVNNSRESKTLLPVIWPGDTDQKPRGWVFPNSGRLLKIGVPRRVNYHEFVSPVKGTDMFQGFCIDVFLAAVDLLPYAVPYKFVPFGDGRINPSATDLVRRITTGEFDGAVGDIAITTERTRMVDFTQPYIESGLVVVAPVRKAESNAWAFLSPFTPMMWAVTAMFFLFVGAVVWILEHRVNDDFRGPPKKQVVTILWFSFSTMFYSHRENTVSTLGRLVLIIWLFVVLIVNSSYTASLTSILTVQQLYSPIKGIESLVNSKDPIGYTQGSFAKNYLIQEIGIAESRLVPLNTPEEAANALKKGPHGGGVSAYIDERSYIELFLSSRCDFTVIGQEFTRDGWGFAFPRDSPLAVDLSTAILEMAENGDLQRIHDKWLLRSACLSQGTKLEVERLNLQSFWGLYLLCGFACFIALLIYLIQVTRQYFKHGSDELDPSEQGSSSGSARLRSFLSFVDEKEETVKSRSKRRQMEKISYRSSIGSSMSSNKDYAQSSPYKNFCANDAQSSPHTTDCANEA 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00402 952 Gene3D - 473 583 - -
Arst5g00402 952 SMART GluR_14 474 815 IPR001320 GO:0015276|GO:0016020
Arst5g00402 952 Gene3D - 783 813 - -
Arst5g00402 952 FunFam Glutamate receptor 148 306 - -
Arst5g00402 952 MobiDBLite consensus disorder prediction 910 927 - -
Arst5g00402 952 FunFam Glutamate receptor 584 714 - -
Arst5g00402 952 SUPERFAMILY Periplasmic binding protein-like II 447 815 - -
Arst5g00402 952 Gene3D - 584 711 - -
Arst5g00402 952 Gene3D - 50 401 - -
Arst5g00402 952 Pfam Bacterial extracellular solute-binding proteins, family 3 493 813 IPR001638 -
Arst5g00402 952 CDD GluR_Plant 473 813 - -
Arst5g00402 952 Pfam Ligand-gated ion channel 814 846 IPR001320 GO:0015276|GO:0016020
Arst5g00402 952 Pfam Receptor family ligand binding region 51 411 IPR001828 -
Arst5g00402 952 SUPERFAMILY Periplasmic binding protein-like I 27 465 IPR028082 -
Arst5g00402 952 MobiDBLite consensus disorder prediction 897 927 - -
Arst5g00402 952 FunFam Glutamate receptor 710 817 - -
Arst5g00402 952 CDD PBP1_GABAb_receptor_plant 33 428 IPR044440 -
Arst5g00402 952 PIRSF IGluLR_plant 1 949 IPR017103 -
Arst5g00402 952 Gene3D - 148 426 - -
Arst5g00402 952 PIRSF IGluLR_plant 1 949 IPR017103 -
Arst5g00402 952 Gene3D - 730 782 - -
Arst5g00402 952 FunFam Glutamate receptor 468 584 - -
Arst5g00402 952 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 893 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00402 Arst-Chr5 3445733 3449984 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00402 5 914 Ion Channels AT3G51480 58.178 0.0 1107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00402 K05387 - gmx:100785258 1434.08