Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00400 ATGCTTAAAGTTTGGTTCTTGGTGTTCATTGTTCTCTCCAATGGGTTCTCATCAACTGGGCAAGACATGCACAATTCCACAGTACCTGATGTTGTAAATATTGGGGCTCTCTTCAATTACAATACCACTTTTGGTAGAACTGTAAAAATTGCGATAAGAGCAGCACTCGAAGAACTGAATGCTAATCCATCTATTCTTGGTAAAACACACTTGAATGTCATACTACAAGAAGATTCTAAATACAGAGGTTTTCTGAGCATTTCTGAGGTTTTGCAGGTTGCAACAAAGCATACTGTGGCAATAATTGGTCCCCAGTCTGCTGTAACAGCTCATGTCATATCTCATATTGCTAATGAGCTCCAAGTTCCGCTGCTATCATTTTCGGCTTTAGATCCCACCCTTTCTTCACTTCAGTTCCCATTCTTTATTAGAACTAGTCATAGTGACCTTTATGTGATGACTGCAATAGCAGACTTTGTTGACTACTATGGGTGGAAAGACGTTATTGCTTTCTACGTCGATGATGATAGTGGGAGGAATGGTATTGAAGCTTTAGGTGATAAGCTTGCGGAGAAACGTTGCAGGATCTCATATAAGGCACCTATGAGCCCTGAACCGACCGATGAAGAAATTACAAACGTGCTTGTTCAGGTGGCTTTGGCAGAATCACGGGTTATAGTTGTTCACGTCAACATTTTCTTGGGCCGCAAGGTTTTCGATATTGCAAAGAGTCTTGGGATGATGGGAAGTGGGTATGTCTGGCTAGCCACTACTTTCCTTTCTGGTATACTTGAAATGAATACTCCCTTCCCTGCAGGATTTACAAATAATATTCAAGGTGTTATTACATTTCGTGTATATACACCAGATTCTGAACTCAAAAGAAGGTTTGCTTCTAAATGGAAAAATTTGACTCAAGGGGAGACTGCTAATGACCCCCTTGGATTAAGTGCTTTAGGTCTCTATGCATATGATACTGTTTATGCACTTGCTCATGCACTAGATGCATTTTTCAAACAAGGGAACCGAATTACTTTCTCAAAGGATCCAAAATTATCATTACTTCATGGAGACAACTTGGGTCTTGATACATTGAACATCTTCAATGAAGGAAATCTTTTGCGCAGAAGCATATATGAAGTTAACATGACCGGTGTGACTGGTACATTCAGGTATACATCTGACAGAGACCTTGTAAATCCTTCATATGAAATCATGAATGTGGTTGGAACAGGGTTTAGGAGTATTGGTTATTGGTCCAATTACTCTGGATTATCAGTTGATCCTCCAGAAGCTCTTTCTTCCAAACCAGCCAATAATTCCAGGGCTGGTAAAATGTTACGTCCGGTGATTTGGCCTGGAGATACTACCAAAAAACCTCGTGGTTGGGTTTTTCCAAACAATGGAAGGTTATTGAAAATTGGAGTTCCAAAAAGCATTAGTTACCATGAATTTGTCTCACAAGTACCAGGCACCGATACATTTGAGGGATTCTGCATTGAGGTATTTCTTGCTGCAGTGAATTTGTTACCTTATGCTGTCCCCTATAAATTTATCCCGTTTGGCGATGACCACAGCAATCCTAGCGCCACTGAACTTGTTCGTCTAATCACAACGGGTGAATTTGATGGTGCTGTTGGTGATATTACAATTACCACAGAAAGAACAAAGATGGTGGATTTTACACAACCTTATATTGAGTCTGGTCTAGTGGTGGTAGCACCAGTTAAGAAGACAGATTCGAATGCCTGGGCATTTTTGGCCCCATTTACGCCAATGATGTGGGCAGTCACAGCTATCTTTTTTCTATTTGTGGGAGCTGTTGTTTGGATATTGGAGCATAGAGTGAATGATGATTTTAGGGGCCCTCCCAAGCAACAAATAGTAACTACTTTATGGTTTAGTTTTTCAACCATGTTCTTTTCACAAAAGGAAAATACAGTGAGCACGCTTGGTCGCTTTGTGCTGATTATATGGCTATTTGTAGTTCTTATAGTTAACTCGAGTTACACAGCAAGTCTGACCTCAATTCTCACTGTGCAACAACTTTCTTCACCAATCAAAGGAATTGAAAGTTTAGTGAATGGAAAGGATCCTATTGGCTACACACAAGGTTCTTTTGCAAAAAATTATTTAATTGAGGAAATTGGCATTAACGAATCCAGGCTTGTTGCTCTGAACACACCGGAGGAAGCTGCGAATGCACTAAAAAAGGGTCCCCATGATGGGGGTATCTGTGCATATATTGATGAGCGTGCCTATATGGAGCTCTTCCTTTCAACCCGGCCTTTCCACGAGACTCTCCGTTAG 2310 0.4069 MLKVWFLVFIVLSNGFSSTGQDMHNSTVPDVVNIGALFNYNTTFGRTVKIAIRAALEELNANPSILGKTHLNVILQEDSKYRGFLSISEVLQVATKHTVAIIGPQSAVTAHVISHIANELQVPLLSFSALDPTLSSLQFPFFIRTSHSDLYVMTAIADFVDYYGWKDVIAFYVDDDSGRNGIEALGDKLAEKRCRISYKAPMSPEPTDEEITNVLVQVALAESRVIVVHVNIFLGRKVFDIAKSLGMMGSGYVWLATTFLSGILEMNTPFPAGFTNNIQGVITFRVYTPDSELKRRFASKWKNLTQGETANDPLGLSALGLYAYDTVYALAHALDAFFKQGNRITFSKDPKLSLLHGDNLGLDTLNIFNEGNLLRRSIYEVNMTGVTGTFRYTSDRDLVNPSYEIMNVVGTGFRSIGYWSNYSGLSVDPPEALSSKPANNSRAGKMLRPVIWPGDTTKKPRGWVFPNNGRLLKIGVPKSISYHEFVSQVPGTDTFEGFCIEVFLAAVNLLPYAVPYKFIPFGDDHSNPSATELVRLITTGEFDGAVGDITITTERTKMVDFTQPYIESGLVVVAPVKKTDSNAWAFLAPFTPMMWAVTAIFFLFVGAVVWILEHRVNDDFRGPPKQQIVTTLWFSFSTMFFSQKENTVSTLGRFVLIIWLFVVLIVNSSYTASLTSILTVQQLSSPIKGIESLVNGKDPIGYTQGSFAKNYLIEEIGINESRLVALNTPEEAANALKKGPHDGGICAYIDERAYMELFLSTRPFHETLR 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00400 769 Gene3D - 583 710 - -
Arst5g00400 769 Gene3D - 50 400 - -
Arst5g00400 769 Gene3D - 148 425 - -
Arst5g00400 769 SUPERFAMILY Periplasmic binding protein-like II 448 764 - -
Arst5g00400 769 PRINTS Metabotropic glutamate GPCR signature 101 127 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst5g00400 769 PRINTS Metabotropic glutamate GPCR signature 133 152 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst5g00400 769 PRINTS Metabotropic glutamate GPCR signature 168 185 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst5g00400 769 PRINTS Metabotropic glutamate GPCR signature 152 168 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst5g00400 769 CDD PBP1_GABAb_receptor_plant 33 429 IPR044440 -
Arst5g00400 769 Gene3D - 468 582 - -
Arst5g00400 769 FunFam Glutamate receptor 148 306 - -
Arst5g00400 769 Pfam Receptor family ligand binding region 49 410 IPR001828 -
Arst5g00400 769 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 763 IPR015683 -
Arst5g00400 769 FunFam Glutamate receptor 583 713 - -
Arst5g00400 769 Pfam Bacterial extracellular solute-binding proteins, family 3 492 746 IPR001638 -
Arst5g00400 769 SUPERFAMILY Periplasmic binding protein-like I 27 464 IPR028082 -
Arst5g00400 769 SMART GluR_14 473 765 IPR001320 GO:0015276|GO:0016020
Arst5g00400 769 PIRSF IGluLR_plant 1 766 IPR017103 -
Arst5g00400 769 FunFam Glutamate receptor 467 583 - -
Arst5g00400 769 Pfam Ligand-gated ion channel 594 697 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00400 Arst-Chr5 3440673 3445121 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00400 5 762 Ion Channels AT3G51480 57.520 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00400 K05387 - gmx:100793320 1181.39