Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00399 ATGCTTAAAGTTTGGTTCTTGGTGTTCATTGTTCTCTCCAATGGGTTCTCATCAACTGGGCAAGACATGCACAATTCCACAGTACCTGATGTTGTAAATATTGGGGCTCTCTTCAATTACAATACCACTTTTGGTAGAACTGTAAAAATTGCGATAAGAGCAGCACTCGAAGAACTGAATGCTAATCCATCTATTCTTGGTAAAACACACTTGAATGTCATACTACAAGAAGATTCTAAATACAGAGGTTTTCTGAGCATTTCTGAGGTTTTGCAGGTTGCAACAAAGCATACTGTGGCAATAATTGGTCCCCAGTCTGCTGTAACAGCTCATGTCATATCTCATATTGCTAATGAGCTCCAAGTTCCGCTGCTATCATTTTCGGCTTTAGATCCCACCCTTTCTTCACTTCAGTTCCCATTCTTTATTAGAACTAGTCATAGTGACCTTTATGTGATGACTGCAATAGCAGACTTTGTTGACTACTATGGGTGGAAAGACGTTATTGCTTTCTACGTCGATGATGATAGTGGGAGGAATGGTATTGAAGCTTTAGGTGATAAGCTTGCGGAGAAACGTTGCAGGATCTCATATAAGGCACCTATGAGCCCTGAACCGACCGATGAAGAAATTACAAACGTGCTTGTTCAGGTGGCTTTGGCAGAATCACGGGTTATAGTTGTTCACGTCAACATTTTCTTGGGCCGCAAGGTTTTCGATATTGCAAAGAGTCTTGGGATGATGGGAAGTGGGTATGTCTGGCTAGCCACTACTTTCCTTTCTGGTATACTTGAAATGAATACTCCCTTCCCTGCAGGATTTACAAATAATATTCAAGGTGTTATTACATTTCGTGTATATACACCAGATTCTGAACTCAAAAGAAGGTTTGCTTCTAAATGGAAAAATTTGACTCAAGGGGAGACTGCTAATGACCCCCTTGGATTAAGTGCTTTAGGTCTCTATGCATATGATACTGTTTATGCACTTGCTCATGCACTAGATGCATTTTTCAAACAAGGGAACCGAATTACTTTCTCAAAGGATCCAAAATTATCATTACTTCATGGAGACAACTTGGGTCTTGATACATTGAACATCTTCAATGAAGGAAATCTTTTGCGCAGAAGCATATATGAAGTTAACATGACCGGTGTGACTGGTACATTCAGGTATACATCTGACAGAGACCTTGTAAATCCTTCATATGAAATCATGAATGTGGTTGGAACAGGGTTTAGGAGTATTGGTTATTGGTCCAATTACTCTGGATTATCAGTTGATCCTCCAGAAGCTCTTTCTTCCAAACCAGCCAATAATTCCAGGGCTGGTAAAATGTTACGTCCGGTGATTTGGCCTGGAGATACTACCAAAAAACCTCGTGGTTGGGTTTTTCCAAACAATGGAAGGTTATTGAAAATTGGAGTTCCAAAAAGCATTAGTTACCATGAATTTGTCTCACAAGTACCAGGCACCGATACATTTGAGGGATTCTGCATTGAGGTATTTCTTGCTGCAGTGAATTTGTTACCTTATGCTGTCCCCTATAAATTTATCCCGTTTGGCGATGACCACAGCAATCCTAGCGCCACTGAACTTGTTCGTCTAATCACAACGGGTGAATTTGATGGTGCTGTTGGTGATATTACAATTACCACAGAAAGAACAAAGATGGTGGATTTTACACAACCTTATATTGAGTCTGGTCTAGTGGTGGTAGCACCAGTTAAGAAGACAGATTCGAATGCCTGGGCATTTTTGGCCCCATTTACGCCAATGATGTGGGCAGTCACAGCTATCTTTTTTCTATTTGTGGGAGCTGTTGTTTGGATATTGGAGCATAGAGTGAATGATGATTTTAGGGGCCCTCCCAAGCAACAAATAGTAACTACTTTATGGTTTAGTTTTTCAACCATGTTCTTTTCACAAAAGGAAAATACAGTGAGCACGCTTGGTCGCTTTGTGCTGATTATATGGCTATTTGTAGTTCTTATAGTTAACTCGAGTTACACAGCAAGTCTGACCTCAATTCTCACTGTGCAACAACTTTCTTCACCAATCAAAGGAATTGAAAGTTTAGTGAATGGAAAGGATCCTATTGGCTACACACAAGGTTCTTTTGCAAAAAATTATTTAATTGAGGAAATTGGCATTAACGAATCCAGGCTTGTTGCTCTGAACACACCGGAGGAAGCTGCGAATGCACTAAAAAAGGGTCCCCATGATGGGGGTATCTGTGCATATATTGATGAGCGTGCCTATATGGAGCTCTTCCTTTCAACCCGGTGCGATTTCACTGTTATAGGTCAAGAGTTCACCAGAGATGGTTGGGGATTTGTCAGCCTTTCCACGAGACTCTCCGTTAGCAATAGACCTGTCAACAGCAATTCTTGA 2394 0.4077 MLKVWFLVFIVLSNGFSSTGQDMHNSTVPDVVNIGALFNYNTTFGRTVKIAIRAALEELNANPSILGKTHLNVILQEDSKYRGFLSISEVLQVATKHTVAIIGPQSAVTAHVISHIANELQVPLLSFSALDPTLSSLQFPFFIRTSHSDLYVMTAIADFVDYYGWKDVIAFYVDDDSGRNGIEALGDKLAEKRCRISYKAPMSPEPTDEEITNVLVQVALAESRVIVVHVNIFLGRKVFDIAKSLGMMGSGYVWLATTFLSGILEMNTPFPAGFTNNIQGVITFRVYTPDSELKRRFASKWKNLTQGETANDPLGLSALGLYAYDTVYALAHALDAFFKQGNRITFSKDPKLSLLHGDNLGLDTLNIFNEGNLLRRSIYEVNMTGVTGTFRYTSDRDLVNPSYEIMNVVGTGFRSIGYWSNYSGLSVDPPEALSSKPANNSRAGKMLRPVIWPGDTTKKPRGWVFPNNGRLLKIGVPKSISYHEFVSQVPGTDTFEGFCIEVFLAAVNLLPYAVPYKFIPFGDDHSNPSATELVRLITTGEFDGAVGDITITTERTKMVDFTQPYIESGLVVVAPVKKTDSNAWAFLAPFTPMMWAVTAIFFLFVGAVVWILEHRVNDDFRGPPKQQIVTTLWFSFSTMFFSQKENTVSTLGRFVLIIWLFVVLIVNSSYTASLTSILTVQQLSSPIKGIESLVNGKDPIGYTQGSFAKNYLIEEIGINESRLVALNTPEEAANALKKGPHDGGICAYIDERAYMELFLSTRCDFTVIGQEFTRDGWGFVSLSTRLSVSNRPVNSNS 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00399 797 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 780 IPR015683 -
Arst5g00399 797 Gene3D - 583 710 - -
Arst5g00399 797 SMART GluR_14 473 795 IPR001320 GO:0015276|GO:0016020
Arst5g00399 797 CDD PBP1_GABAb_receptor_plant 33 429 IPR044440 -
Arst5g00399 797 Gene3D - 468 582 - -
Arst5g00399 797 Pfam Receptor family ligand binding region 49 410 IPR001828 -
Arst5g00399 797 FunFam Glutamate receptor 467 583 - -
Arst5g00399 797 Pfam Bacterial extracellular solute-binding proteins, family 3 492 746 IPR001638 -
Arst5g00399 797 Pfam Ligand-gated ion channel 594 697 IPR001320 GO:0015276|GO:0016020
Arst5g00399 797 PIRSF IGluLR_plant 1 782 IPR017103 -
Arst5g00399 797 SUPERFAMILY Periplasmic binding protein-like II 448 780 - -
Arst5g00399 797 PRINTS Metabotropic glutamate GPCR signature 168 185 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst5g00399 797 PRINTS Metabotropic glutamate GPCR signature 101 127 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst5g00399 797 PRINTS Metabotropic glutamate GPCR signature 133 152 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst5g00399 797 PRINTS Metabotropic glutamate GPCR signature 152 168 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst5g00399 797 Gene3D - 50 400 - -
Arst5g00399 797 FunFam Glutamate receptor 583 713 - -
Arst5g00399 797 Gene3D - 148 425 - -
Arst5g00399 797 FunFam Glutamate receptor 148 306 - -
Arst5g00399 797 SUPERFAMILY Periplasmic binding protein-like I 27 464 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00399 Arst-Chr5 3440643 3445121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00399 5 779 Ion Channels AT3G51480 57.677 0.0 951
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00399 K05387 - gmx:100793320 1216.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00399 5 3440643 3445121 Arst5g00399 5 3440643 3445121 ECH
Arst1g01175 1 11552536 11557768 Arst5g00399 5 3440643 3445121 ECH
Arst5g00399 5 3440643 3445121 Arst1g01175 1 11552536 11557768 PCT