Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00397 ATGAAAATTTGTCTCTTCATCTTCCATTTCTTCGTGTTGTCGATTCTCGCAGCTCAAATATCCTTCTCAGATTCACACGCCTCTGACCTCTCTCTTCTCCACCACCATACCAACCGTCAACCTGCTACGGGCCTCATTGCAGCCCTAGATGGCACTCTCTATCTGCTCGACACTGATTCCGGCAGGGTAATTTGGTCATTCTCCACTGGTTCCCCCATCTACCATTCCTACCAGGCACCTCTCAATTCCGCCAATGAATCTGGACTCATCGAATGCGGTGATGATTGGGAACTCATCCTTCATCACAACCACTTTGGTAAAACGAGGCTCTCGGAATCTATTGCTGATTATGTTGCGGATACGCCTGTTATGTCAGAAGATGGGGCAGTTGTTCTTGGATCCAAAAGAACAACTGTCTTTGAAGTTGATGCTAAAACCGGAAGGCTTGTAAGAAGTTATACCATTGCAGCCTTTGATGATTCGTCCGCCGCCGGCTGGAGTGATGACAGGAAGAATGTGGCTACTGACATTGGTACAAGCAGTAGTGAGCTTGCTGATCCTGCACAGCTTAATCCGCCGGAGTTTTTACTCAAGATATTTAGGACTGATTATCTTTTGCAATCTGTTGGTCCTGGATCTGGAATGGTTTTGTGGACCATGAAAGTAGCTGAATTTAAGGCTGTATTACATTGCCAACATGATGAGTATCCTTCTGACCGGGTGTCATTCGAGGCAGGAGGTCAATATGCTTTCGACAGTGGCTTACGTTTTGCTATGCCGTATGCATGTCATGACAGAAAACTAAAAGATGTCTATCGCCAAAGGAAGAATTTTCTGCTAGAACATGGCAACCCTGAAAGATTATCCGAGGGTTATCAAGAGTTTGATATGCTCCCAACCCCTTCTTCAGAACTGATGCTTCCATTGCAACCTAACAAAAATAGGGTTCCCCATGGTCCTAATAGTAAAATGATGCTTCCTGGGGCCGTGCTAAATCATTTGCCTGCTTTGCCACCGAAAATCAACTATGATAACAATGATCATGCAGTAATGCTCCACCGGTTTCCTATGGATATGGCTGGACCTGGTAAAATTGATGTGAGCAATGGGATTGAATGGTCAACAACATCAGCTCTTATATTGTTTATAGGATTTATTCTCTGCATTTTGATCTTTTGCTTCTGCCTTAAGAAAAAGAGAGTGCAGAAGGACCAAAACATTGAGGCAATTTTAAAAAGTCCTTCTAAGAAAAAGAGAGCACGTAAGTCTGGAAGGAATGCCATCGTTGTTGACAAACAGGATAGGAATTCATTGCCAGCTGAGGAGGATATACTGACAAATAATGTTGATGGACGGAAGATTGGTAAACTAATTGTACTAAACAAAGAAATTGCTAAGGGTAGCAATGGTACCATTGTTCTGGAGGGGATATATGAAGGTCGGGAAGTTGCTGTCAAACGTCTTGTTCAAGCTCATCATGATGTAGCCAGCAAAGAAATCCAAAACCTTATTGCATCTGATTGCCATCCAAACATTGTTCGATGGTATGGGGTCGAATATGATAATGATTTTGTTTATCTTGCTTTGGAGCGTTGTATATGCAACTTGGATGATTTGATTCAAAATTACTCTGATATATCAGAAAACCCAGTGCATAGCAAGGATCAAGGTTCTAAGATTGTTATAAAGGCTCAGGTGGAGACAGGGAAGGATGACGTGCAATATCTTTGGAAAGCAAGTGGCCATCCATCATCGCTATTACTTAAACTAATGAGGGATGTAATTTCTGGGCTTGCTCATTTGCATGAACTAGGAATAATACACCGGGATTTGAAACCCCAAAATGTTTTGATAACCAAAGAAAGATCACTATGTGCAAAGCTTTCTGATATGGGAATTAGCAAACGCCTTCTTGAAGATATGTCTACGTTGGGTCATAGTGTTACTGGATGTGGGAGTTCAGGGTGGCAGGCACCAGAGCAGCTTGTTCAAGGACGCCAATCACGAGCTTTAGATTTGTTTAGTTTGGGATGTGTCCTATTTTTCTGTATGACTGGGGGAAGACATCCATTTGGAGAGCGCCTTGAGCGCGATGTTAATATTCTAAAAAATCGAAAGGATCTCTTTTTAATAGAGTCCATTCCAGAGGCAGAGGACCTTATCTCTCGTTTATTAAACCCTGATCCGAATTTAAGGCCAAAGGCAATTGAAGTGTTGCACCATCCTCTTTTCTGGAGTTCTGAGATGAGACTTTCATTTCTTCGAGACGCCAGTGATAGGGTGGAACTTGAGGACAGAGAGACTGATTCTGATCTTCTTAGGACATTAGAAAGCATTGCACCAATGGCTTTAGGTGCAAAATGGGACGAAAAGATGGAACCGGCTTTCATTACTAATATTGGTCGTTACAGAAGATATAAATATGACAGTGTTCGAGACTTATTAAGGGTCATGAGAAACAAGCTAAATCATTATAGAGAATTACCTCAAGAAATTCAGGAACTTGTAGGATCTGTTCCAGAAGGATTCAATGACTATTTTGCAAGTCGGTTCCCAAGGCTCTTGATTGAAGTATACAGAGTTATATACGAATATTGCAAGGAAGATCAATGTTTTCAAAGGTATTTTAGAGACAATTAG 2640 0.4178 MKICLFIFHFFVLSILAAQISFSDSHASDLSLLHHHTNRQPATGLIAALDGTLYLLDTDSGRVIWSFSTGSPIYHSYQAPLNSANESGLIECGDDWELILHHNHFGKTRLSESIADYVADTPVMSEDGAVVLGSKRTTVFEVDAKTGRLVRSYTIAAFDDSSAAGWSDDRKNVATDIGTSSSELADPAQLNPPEFLLKIFRTDYLLQSVGPGSGMVLWTMKVAEFKAVLHCQHDEYPSDRVSFEAGGQYAFDSGLRFAMPYACHDRKLKDVYRQRKNFLLEHGNPERLSEGYQEFDMLPTPSSELMLPLQPNKNRVPHGPNSKMMLPGAVLNHLPALPPKINYDNNDHAVMLHRFPMDMAGPGKIDVSNGIEWSTTSALILFIGFILCILIFCFCLKKKRVQKDQNIEAILKSPSKKKRARKSGRNAIVVDKQDRNSLPAEEDILTNNVDGRKIGKLIVLNKEIAKGSNGTIVLEGIYEGREVAVKRLVQAHHDVASKEIQNLIASDCHPNIVRWYGVEYDNDFVYLALERCICNLDDLIQNYSDISENPVHSKDQGSKIVIKAQVETGKDDVQYLWKASGHPSSLLLKLMRDVISGLAHLHELGIIHRDLKPQNVLITKERSLCAKLSDMGISKRLLEDMSTLGHSVTGCGSSGWQAPEQLVQGRQSRALDLFSLGCVLFFCMTGGRHPFGERLERDVNILKNRKDLFLIESIPEAEDLISRLLNPDPNLRPKAIEVLHHPLFWSSEMRLSFLRDASDRVELEDRETDSDLLRTLESIAPMALGAKWDEKMEPAFITNIGRYRRYKYDSVRDLLRVMRNKLNHYRELPQEIQELVGSVPEGFNDYFASRFPRLLIEVYRVIYEYCKEDQCFQRYFRDN 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00397 879 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 47 178 IPR011047 -
Arst5g00397 879 SMART PGNneu 809 863 - -
Arst5g00397 879 SMART serkin_6 458 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00397 879 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 748 879 - -
Arst5g00397 879 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 450 530 - -
Arst5g00397 879 SMART ire1_9 37 68 IPR018391 -
Arst5g00397 879 SMART ire1_9 122 154 IPR018391 -
Arst5g00397 879 Gene3D KEN domain 747 879 IPR038357 -
Arst5g00397 879 CDD RNase_Ire1 748 876 - -
Arst5g00397 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 606 618 IPR008271 GO:0004672|GO:0006468
Arst5g00397 879 Gene3D - 34 229 IPR015943 GO:0005515
Arst5g00397 879 ProSiteProfiles KEN domain profile. 747 878 IPR010513 GO:0004540|GO:0006397
Arst5g00397 879 SUPERFAMILY Protein kinase-like (PK-like) 460 748 IPR011009 -
Arst5g00397 879 Pfam Protein kinase domain 461 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00397 879 Gene3D Transferase(Phosphotransferase) domain 1 578 746 - -
Arst5g00397 879 Pfam Ribonuclease 2-5A 750 876 IPR010513 GO:0004540|GO:0006397
Arst5g00397 879 Pfam PQQ enzyme repeat 48 74 IPR002372 -
Arst5g00397 879 Gene3D Phosphorylase Kinase; domain 1 445 530 - -
Arst5g00397 879 ProSiteProfiles Protein kinase domain profile. 458 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00397 879 PANTHER IRE1-RELATED 110 878 IPR045133 GO:0004521|GO:0004674|GO:0030968
Arst5g00397 879 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 568 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00397 Arst-Chr5 3435024 3439416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00397 484 743 MAP Kinase Kinase Kinase AT3G06030 26.515 5.87e-21 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Arst5g00397 Pkinase 1.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00397 K08852 - gmx:102661527 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00397 5 3435024 3439416 Arst5g00397 5 3435024 3439416 ECH
Arst5g00397 5 3435024 3439416 Arst1g01177 1 11557888 11561772 PCT