Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00376 ATGGAGTTTGAATCTCTGAGTCTGGCCAATGAGGTCATTGAATTTGATATGATTGGTTTGGGGGATGATGGTGCCATTGATATTGAACATCATGTTGAAGATGATGATGACTATATCAGTGTTGACAATGTTTTTGCTGCTACTGCCGCCACCAATATAGCTGCCACTGTTGGACCTCAAATTCCTATAGGGGACACAAATCTTGAACCTTATCAGGGCATGGAATTTGAATCAGAAGAGGCTGCTAAGGCGTTTTATAATTCCTATGCTCGCCGCATTGGATTTAGTACGAGGGTGAGTATGTCCCGTCGCTCCAGACGTGATGGTGCTATAATTCAGAGGTCTTTTGTGTGTGCCAAGGAAGGTTTTCGTATGGAGAAGGAGAAGAATTCTCTTGATGGCAGAGTCAAACGACCTCGTGCTGAAACTCGTGTTGGTTGCAAGGCCATGTTGGTTGTGAAAATTCAAGTGTCTGGCAGATGGGTTGTTTCTTCATTTGTCAAGGAGCACAACCATGAATTGGTTCCACCTGATAAGGTGCATTGCCTTCGCTCTCACCGCCATGTTTCGGGTCCAGCTAAATCATTGATTGATACCTTGCAGGGTGCTGGTATAGGGCCTAGTGGAATTATGTCTGCACTTATCAAAGAATATGGTGGAATTAGCAACATTGGGTTCACTGAGCGTGACTGTAGGAACTACATGAGGAGCAGCCGGCAAAGGACCCTTGGTGGTGACACTCAAATCCTCTTGGATTACTTGAAGAGTAAACAAGCTAAGAATCCTTTGTTTTTCTATGCCGTACAAGGTGATGAGGATCGCTACATGAGTAATATCTTCTGGGCTGATCCTAAGGCCAGGACTAACTACACTTATTTTGGTGACACTGTCACATTTGACACAACATATAGGTCAAACCGCTATAGATTGCCTTTTGCACCTTTCACTGGAGTGAATCATCACGGACAGCCTGTATTATTTGGTTGTGCTCTCTTGATAAATGAATCCGAAGCATCGTTTGTCTGGCTCTTCAAAATGTGGCTTGAAGCGATGTCAGGGCAATCTCCAGTCTCAATCACTACTGATCATGATCGGGTGATTCGCGTAGCCATTAACCGTGTCTTTCCTAATACCCGTCATCGGTTTTGCAAGTGGCACATTTTTAAAGAGTGCCAAGAGAAGTTGTCTCATGTGCTTTCTGAACATGTTAATTTTGAAGCTGACCTTCATAAATGTGTTAATCTGCCAGAGTCCATTGATGAGTTTGAGTCTTGTTGGTCCTCCCTAATAGATAGTTATAATCTCAGAGAACATGAATGGCTCCAAGCAATTTATGGTGATAGGCGGCAGTGGGTTCCCGTGTACTTGAGAGACACATTTTTTGCAGAAATGTCGATAACACAGCGAAGTGATAGCATAAACTCTTACTTTGATGGGTATATTAATGCATCAACAACACTTCAGCATTTTGTTAAGCAGTATGAGAAGGCCCTAGAAAGTCGTCTTGAGAAAGAAGTTAAAGCTGATTATGACACAATAAACACCACTCCAGTTTTGAACACACCATCACCTATGGAGAAACAAGCAGCTGGGATTTACACAAAGAGATTGTTTATCAAATTTCAAGAAGAGTTGGTTGAGACATTAACTTATTTGGCAAACAAAGTAGGTGAAGAAGAAATAACTTCTGTGTATAGAGTAGCCAAATATGGGGATATTCATAGGGCTTACTTTGTCAGATTTAACTCTTTTGAGATGAAGGTTACTTGTAGTTGCCAGATGTTTGAGTTTTTGGGTCTGGTTTGTAGACATATACTGACTGTTTTTAGGGTGACAAATATTCTTACTTTACCTTCTCATTATATTCTAAAAAGATGGACCAGGAATGCTAAAAGTGGAGTCATCTTGGATGAACACACCCCTGATTTGCTAAATGGTGCACGAGAATCTCTAACTATACGATATAATAATCTTCGTCATGAGGCCCTCAAGTATGTTGATGACGGAATAAGGTCTCCAAGAGTTTACGATGTTGCTATGAGTGCGCTACAGGAGGCTGCAAATAAAGTGGCACGAGCGACTAAGAATGATGGAAGACTGGTCATTTCAAATGGAACTTATAAAGAAGATTTACGGTGGAACAATGAAGCTACTACAAGTTACAGGGATCCTCAAACCAGTTTGCAACAATCTTCATCCAAGGATGACCATGACAGAACAATTGAGAAGTTGACAAGACAACTTGACCGAGCTCAAAGGAAGTGTGAAGTTTATAGGTCAAACTTGCTGTCAATTCTAAAAGACATGGAAGAGCAGAAGCTAGAATTATCAGTAAAAGTCCAAAATATCAAGTTAGGGATGAAAGATTGA 2370 0.4122 MEFESLSLANEVIEFDMIGLGDDGAIDIEHHVEDDDDYISVDNVFAATAATNIAATVGPQIPIGDTNLEPYQGMEFESEEAAKAFYNSYARRIGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRMEKEKNSLDGRVKRPRAETRVGCKAMLVVKIQVSGRWVVSSFVKEHNHELVPPDKVHCLRSHRHVSGPAKSLIDTLQGAGIGPSGIMSALIKEYGGISNIGFTERDCRNYMRSSRQRTLGGDTQILLDYLKSKQAKNPLFFYAVQGDEDRYMSNIFWADPKARTNYTYFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCALLINESEASFVWLFKMWLEAMSGQSPVSITTDHDRVIRVAINRVFPNTRHRFCKWHIFKECQEKLSHVLSEHVNFEADLHKCVNLPESIDEFESCWSSLIDSYNLREHEWLQAIYGDRRQWVPVYLRDTFFAEMSITQRSDSINSYFDGYINASTTLQHFVKQYEKALESRLEKEVKADYDTINTTPVLNTPSPMEKQAAGIYTKRLFIKFQEELVETLTYLANKVGEEEITSVYRVAKYGDIHRAYFVRFNSFEMKVTCSCQMFEFLGLVCRHILTVFRVTNILTLPSHYILKRWTRNAKSGVILDEHTPDLLNGARESLTIRYNNLRHEALKYVDDGIRSPRVYDVAMSALQEAANKVARATKNDGRLVISNGTYKEDLRWNNEATTSYRDPQTSLQQSSSKDDHDRTIEKLTRQLDRAQRKCEVYRSNLLSILKDMEEQKLELSVKVQNIKLGMKD 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00376 789 Coils Coil 734 761 - -
Arst5g00376 789 MobiDBLite consensus disorder prediction 715 740 - -
Arst5g00376 789 Pfam SWIM zinc finger 585 611 IPR007527 GO:0008270
Arst5g00376 789 Pfam FAR1 DNA-binding domain 85 176 IPR004330 -
Arst5g00376 789 MobiDBLite consensus disorder prediction 715 731 - -
Arst5g00376 789 ProSiteProfiles Zinc finger SWIM-type profile. 577 613 IPR007527 GO:0008270
Arst5g00376 789 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 64 691 IPR031052 GO:0006355
Arst5g00376 789 Pfam MULE transposase domain 297 389 IPR018289 -
Arst5g00376 789 SMART 26again6 588 615 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00376 Arst-Chr5 3202978 3206824 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst5g00376 MULE 1.4e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00376 - - gmx:100782414 1337.4