Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00348 ATGGCTGGATCAGCTTCAGGATCAGGGTCAGGGTCAGCGTCAGTGAGTGCTGATACATGGAAGGCTCATTTAGCCATGGCCATGGTGCAGCTCTTATATGGTGGATACCATGTCATCACAAAAGTGGCCCTCAATGTTGGTGTCAACGAATTAGTCTTCTGTGTGTTCAGGGATCTCGTTGCCCTTTCTATCCTTGCTCCTGTCGCTTATTTCCATGAAAAGCGTACACGGCCCCCAATCACAAAGCGCCTATTGCTGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATGGGTTTAAGCTATACTAATCCAACATATGCTTCTGCCACGCAGCCAGCAATTCCAGTCTTTACGTTTCTGTTTACTGTAATGATGGGTACAGAAAGAGTAAACTTGCTAAGATATGAAGGGATTGCAAAGATTGGAGGAACTCTCATCTGTGTTTTTGGTGCTGTATTGATGGTTTTGTATCGAGGTCCGGCTCTGATAGGATATTCAGATCTAGACCATGTAGCACTAACTGAAATTAGTGCCAGAGGTCAGCCAGAGCCAGCTGGATGGTTAATGGATGGTTTGCAAGATTTTGGACTAGATCGATTTCATATTGGGGTTTTGTGTTTGATAGCAAACTGCATGTGCATGGCTGCTTTTTTGGCCCTTCAGGCACCATTATTGAATAAGTATCATGCACACATATCTCTCACAGCATATTCGTACTTTTTTGGAGCTGTACTGATGGTGATATCATCGATATTCATGACTGATCCATCGGCTGACTGGACTTTGACGCGGTCAGAAGTAGTTGCTGTTATTTATGCTGGAGTTATTGCATCTGCCCTTAATTATGGAATCATTACATGGAGCAACAAGATTCTGGGGCCAGCTTTGGTTTCCCTTTACAATCCCCTCCAACCAGCATTTTCTACCCTTCTGTCCCTAATCTTCCTTGGAAGTCCAATTTACTTGGGCAGTATCTTGGGGGGACTTTTTATCATTGCTGGCTTATACATTGTTACATGGGGATCTTACAAAGAAAAACAAGCAAATGCTGGAGTTATTCCTATTGCTTCTTGGGTGTCTGAGCCACTTATTCATGAAAAGACTGCATACCAGAAAGGTCATGCTATTTCAGGGTCATCCAGCATTTCCATTAATCCAAAATCATTGGATTAA 1197 0.4286 MAGSASGSGSGSASVSADTWKAHLAMAMVQLLYGGYHVITKVALNVGVNELVFCVFRDLVALSILAPVAYFHEKRTRPPITKRLLLSFFFLGLTGIFGNQLLFLMGLSYTNPTYASATQPAIPVFTFLFTVMMGTERVNLLRYEGIAKIGGTLICVFGAVLMVLYRGPALIGYSDLDHVALTEISARGQPEPAGWLMDGLQDFGLDRFHIGVLCLIANCMCMAAFLALQAPLLNKYHAHISLTAYSYFFGAVLMVISSIFMTDPSADWTLTRSEVVAVIYAGVIASALNYGIITWSNKILGPALVSLYNPLQPAFSTLLSLIFLGSPIYLGSILGGLFIIAGLYIVTWGSYKEKQANAGVIPIASWVSEPLIHEKTAYQKGHAISGSSSISINPKSLD 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00348 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 352 - -
Arst5g00348 398 PANTHER WAT1-RELATED PROTEIN 24 354 IPR030184 GO:0016020|GO:0022857
Arst5g00348 398 Pfam EamA-like transporter family 23 149 IPR000620 GO:0016020
Arst5g00348 398 Pfam EamA-like transporter family 210 347 IPR000620 GO:0016020
Arst5g00348 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 57 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00348 Arst-Chr5 2955239 2959008 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00348 105 375 Nodulin-like Gene Family AT5G45370 62.545 9.90e-122 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00348 - - gmx:100787738 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00348 5 2955239 2959008 Arst5g00348 5 2955239 2959008 ECH