Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00342 ATGCCACAAAACTGCATAGCACCAAAACCAGAATACAACACTAGTAGTAATAGTAGTAGTAGTACTCATCATCACTCTATGGAAGCAGCCTTAGAGAATAATAATACCAATGAACAACAATCCATACAGAAACTCACTATGTTCCCCATAACTTTGAAGTTTGAGGAATTGGTGTACAAAGTGAAACTAGAACAGAAAGGAGGATGTTGGGGAAGCAACAAATGGAGCTGCAAAGAGAAAACAATTCTGAATGGAATCAGTGGTTGTGTTTGCCCTGGTGAGATTCTTGCCATGCTTGGCCCTTCAGGGAGTGGCAAAACCACACTCCTTACAGCTCTCGGAGGCCGTCTCACCGGAAAACTCTCCGGCAAGATAACATACAACAACAATCCATTCTCAGGTTCAATCAAGAGAAGAACAGGTTTTGTAGCACAAGATGATGTTCTATATCCTCACCTAACTGTAACTGAAACACTATTCTTCACTGCACTTCTGAGGCTTCCAAAGACTTTAACAAGAGATGAGAAGGTTCATCATGTTGAGAGAGTGATCAGTGAATTGGGATTAACAAGGTGTAGGAGCAGCATGATTGGAGGACCTTTGTTCAGAGGAATTTCTGGTGGAGAAAAGAAGAGAGTTAGTATTGGACAAGAAATGCTTATTAATCCTAGCTTGTTGCTTCTTGATGAGCCTACTTCTGGTTTGGATTCCACAACTGCTCAGAGGATCTTGAACACTATTAAGAGACTCGCCGGCGGCGGAAGAACCGTTATAACCACCATTCACCAGCCATCTAGCAGGCTATACTACATGTTTGACAAGGTTGTGTTGCTCTCTGAAGGCTCTCCTATTTACTATGGTCCTGCTTCCACTGCTTTGGACTATTTCTCTTCACTTGGATTCTCTACTTCTGTCACTGTTAATCCTTCTGATCTCTTGCTTGATCTTGCCAATGGTAATTAATCAATATTTTCATATATATATATATATGCAAGTGAACAAAGTGAGGGATTAGAACAAGAAAGGAAGCAAGTTAGAGAAGCTCTAATATCAGCTTATGATAAGAACATAGCAACAAATCTGAAAGCTGAGCTGTGCAGTGTTGAGGTGAACAACTACAACAACATGATGATCAAAGATGCATGTGCAAGGAATCAGATCAATCAGGAGCAATGGTGCACAAGTTGGTGGCATCAGTTTAAAGTACTATTGCAGAGGGGAGTGAGGGAGAGAAGGTTTGAAGCATTCAATAGGCTGAGAATATTCCAAGTCATAAGTGTTGCTTTTCTTGGTGGACTCTTGTGGTGGCATACCCCAGAATCACACATTGAAGATCGGGTAGCATTGCTGTTTTTCTTCTCAGTTTTCTGGGGATTCTACCCTCTATACAATGCAGTATTCACATTCCCACAAGAGAGGAGAATGCTGATAAAGGAAAGATCTTCAGGAATGTACAGGCTGTCTTCCTACTTCTTAGCAAGAACAATAGGAGACTTGCCATTGGAGCTTGCACTTCCAACTGCATTTGTGTTCATAATCTATTGGATGGGAGGACTCAAACCTGATCCTGTTACATTCATCCTTTCTCTTCTTGTTGTTCTCTACAGTGTCCTTGTTTCTCAAAGCTTAGGCTTAGCATTTGGTGCTATATTAATGGAGATCAAACAAGCAACCACTCTAGCTTCTGTCACAACCCTTGTGTTCCTCATTGCTGGTGGATACTATGTTCAACAGATTCCACCTTTTATAGTGTGGCTAAAGTACTTGAGCTATAGCTACTACTGTTACAAGCTTCTTCTTGGTGTTCAATACACTCAAGATGATTACTATGAATGCTCAAAGGGTGTGATGTGCAAGGTTGCTGATTTTCCACCAATCAAATCAATGGGATTGAATCATCTTTGGGTTGATGTTTGCATTATGGCACTTATGTTGGTTGGTTATAGACTAATTGCTTATTTAGCACTCAATAGAGTAAGGTAG 1983 0.408 MPQNCIAPKPEYNTSSNSSSSTHHHSMEAALENNNTNEQQSIQKLTMFPITLKFEELVYKVKLEQKGGCWGSNKWSCKEKTILNGISGCVCPGEILAMLGPSGSGKTTLLTALGGRLTGKLSGKITYNNNPFSGSIKRRTGFVAQDDVLYPHLTVTETLFFTALLRLPKTLTRDEKVHHVERVISELGLTRCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKRLAGGGRTVITTIHQPSSRLYYMFDKVVLLSEGSPIYYGPASTALDYFSSLGFSTSVTVNPSDLLLDLANGNXSIFSYIYIYASEQSEGLEQERKQVREALISAYDKNIATNLKAELCSVEVNNYNNMMIKDACARNQINQEQWCTSWWHQFKVLLQRGVRERRFEAFNRLRIFQVISVAFLGGLLWWHTPESHIEDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPDPVTFILSLLVVLYSVLVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYVQQIPPFIVWLKYLSYSYYCYKLLLGVQYTQDDYYECSKGVMCKVADFPPIKSMGLNHLWVDVCIMALMLVGYRLIAYLALNRVR 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00342 660 Pfam ABC transporter 83 233 IPR003439 GO:0005524
Arst5g00342 660 SMART AAA_5 92 282 IPR003593 GO:0016887
Arst5g00342 660 ProSitePatterns ABC transporters family signature. 205 219 IPR017871 GO:0005524|GO:0016887
Arst5g00342 660 FunFam ABC transporter G family member 22 70 299 - -
Arst5g00342 660 Pfam ABC-2 type transporter 399 604 IPR013525 GO:0016020|GO:0140359
Arst5g00342 660 MobiDBLite consensus disorder prediction 1 38 - -
Arst5g00342 660 CDD ABCG_EPDR 49 287 - -
Arst5g00342 660 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 298 IPR027417 -
Arst5g00342 660 MobiDBLite consensus disorder prediction 8 38 - -
Arst5g00342 660 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 18 653 - -
Arst5g00342 660 Gene3D - 73 299 IPR027417 -
Arst5g00342 660 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 52 305 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00342 Arst-Chr5 2912179 2915306 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00342 82 282 Calmodulin-binding Proteins AT2G36910 29.717 5.48e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00342 K05681 - gmx:100794774 1090.1