Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00317 ATGAAGACCATCAACGACGATGCTTCCGCACAAGATCTCGACCCTCAAAGCGACCACAGCTCCGATTACCTTCTTACTTCTAACCCACAGCCCCGCCGTCCCCGCGGCTTCGCTGCAGCCGCCGCCAATCCTGCCGGAAAGGGGAAGAAAGAGAGGGAGAAGGAGAAGGAGCGGACTAAGCTCCGCGAGCGTCACCGCCGTGCCATCACTAGCCGTATGCTTGCCGGTCTCCGGCAGTACGGGAACTTCCCTCTCCCGGCGCGTGCTGACATGAACGACGTACTCGCTGCACTCGCGCGTGACGCCGGTTGGGTTGTTGAAGCTGATGGCACCACCTACCGGCAATGTCCTCCACCTTCTCACGTGGGATCTTTTGCAGCTAGGTCAGTTGAAAGTCAACTCTCTGGTGGTTCCTTGAGACCTTGCTCTGTTAAAGAGACACTAGGGAATCAGCCACCGGCACTTAGAATTGATGAATGCTTGTCGCCTGCGTCGATAGATTCTGTGGTAATTGCAGAAAGGGACTCGAAGAACGAGAAATACACAAGTGCAAGCCCTGTAAATGTAGTCCACTGTTTGGAGGCCGATCAGCTCATACATGATATCCATTCTGGTGTGCACGAGAATGACTTTACCTGCACACCATATGTTCCGGTTTACTCAAAGCTACCAGCTGGTATTATTAACAAATTTTGCCAGTTGATTGACCCTGAAGGCATTAGACAGGAGCTAATCCATCTTAAGTCTTTAAATATGGATGGCGTCATTGTGGATTGTTGGTGGGGTATTGTTGAAGGCTGGAATCCGCAGAAATATGTGTGGTCTGGCTATAGGGATCTTTTTAGCATTATTAGAGAATTTAAGCTGAAGTTACAGGTTGTTATGGCATTTCATGAATGTGGAGGGAATGGTTCTAGTGATGCATTGATTGCCCTGCCACAATGGGTTTTGGATATGGGAAAAGATAACCCGGATATATTCTTTACAGATCGTGAAGGGCGGAGGAATACTGAATGCCTTTCCTGGGGAATTGACAAAGAGCGTGTTCTGAAAGGAAGAACTGGAATTGAGGTCTATTTTGATATGATGAGAAGCTTCAGGACAGAGTTTGATGACCTGTTTGCAGAAGGTCTGATTTCTGCAGTAGAAATTGGACTTGGTGCATCTGGGGAGCTGAAATACCCTTCTTTTTCAGAAAGGATGGGATGGAGGTATCCTGGAATAGGCGAGTTTCAGTGCTATGATAAATACCTGCAACATAGTCTGCGCATGGCAGCCAAATTACGTGGTCGTTCTTTCTGGGCTAGAGGACCTGATAATGCTGGACACTACAACTCTATGCCACATGAAACTGGATTCTTTTGTGAACGAGGTGATTATGACAACTATTATGGACGCTTCTTCTTACATTGGTATTCCCAGACATTAATAGACCATGCAGATAATGTTCTGTCCCTTGCAAGCCTTGCTTTTGAGGATACAAAATTAGTTGTCAAGGTTCCTGCTGTATACTGGTGGTATAAGACTCCTAGTCATGCAGCAGAGTTGACAGCCGGATATCACAACCCCACGAATCAGGATGGATACTCTCCTGTGTTTGAGATCTTGAGAAAACATTCTGTCACCATGAAATTTGTCTGTGTAGGATTTCATCTTTCCAACCAGGAAGCTAATGAATCATTAATTGATCCAGAGGGTTTAAGTTGGCAGGTACTAAACTCAGCTTGGGATCGAGGTTTGGTTACTGCTGGAGAGAATGCTCCTCTTTGCTATGATAGAGAAGGTTACAAGAGATTAGTTGAGATGGCCAAGCCCAGCAATGATCCAGATCGCCGGCACTTCTCGTTCTTTGTTGTCCGACAACCATCTATGCTTCAAGGAAATGTTTGCCTGTCGGAATTGGATTTCTTCGTTAAATCCATGCACGGTGAGATTACAGGAGCCATATAA 1950 0.4656 MKTINDDASAQDLDPQSDHSSDYLLTSNPQPRRPRGFAAAAANPAGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALARDAGWVVEADGTTYRQCPPPSHVGSFAARSVESQLSGGSLRPCSVKETLGNQPPALRIDECLSPASIDSVVIAERDSKNEKYTSASPVNVVHCLEADQLIHDIHSGVHENDFTCTPYVPVYSKLPAGIINKFCQLIDPEGIRQELIHLKSLNMDGVIVDCWWGIVEGWNPQKYVWSGYRDLFSIIREFKLKLQVVMAFHECGGNGSSDALIALPQWVLDMGKDNPDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFAEGLISAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQHSLRMAAKLRGRSFWARGPDNAGHYNSMPHETGFFCERGDYDNYYGRFFLHWYSQTLIDHADNVLSLASLAFEDTKLVVKVPAVYWWYKTPSHAAELTAGYHNPTNQDGYSPVFEILRKHSVTMKFVCVGFHLSNQEANESLIDPEGLSWQVLNSAWDRGLVTAGENAPLCYDREGYKRLVEMAKPSNDPDRRHFSFFVVRQPSMLQGNVCLSELDFFVKSMHGEITGAI 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00317 649 MobiDBLite consensus disorder prediction 1 63 - -
Arst5g00317 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 294 315 IPR001554 GO:0000272|GO:0016161
Arst5g00317 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 529 552 IPR001554 GO:0000272|GO:0016161
Arst5g00317 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 251 265 IPR001554 GO:0000272|GO:0016161
Arst5g00317 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 272 290 IPR001554 GO:0000272|GO:0016161
Arst5g00317 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 511 522 IPR001554 GO:0000272|GO:0016161
Arst5g00317 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 460 479 IPR001554 GO:0000272|GO:0016161
Arst5g00317 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 567 589 IPR001554 GO:0000272|GO:0016161
Arst5g00317 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 494 510 IPR001554 GO:0000272|GO:0016161
Arst5g00317 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 387 409 IPR001554 GO:0000272|GO:0016161
Arst5g00317 649 Pfam Glycosyl hydrolase family 14 236 609 IPR001554 GO:0000272|GO:0016161
Arst5g00317 649 MobiDBLite consensus disorder prediction 46 63 - -
Arst5g00317 649 Gene3D Glycosidases 207 647 - -
Arst5g00317 649 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 157 643 IPR001554 GO:0000272|GO:0016161
Arst5g00317 649 Pfam BES1/BZR1 plant transcription factor, N-terminal 46 193 IPR008540 -
Arst5g00317 649 MobiDBLite consensus disorder prediction 1 28 - -
Arst5g00317 649 SUPERFAMILY (Trans)glycosidases 211 644 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00317 Arst-Chr5 2602077 2606839 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00317 59 645 Glycoside Hydrolase AT5G45300 69.949 0.0 873
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Arst5g00317 Glyco_hydro_14 4.1e-85 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00317 K01177 - gmx:100777004 1166.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00317 5 2602077 2606839 Arst5g00317 5 2602077 2606839 ECH