Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00316 ATGAAGCAAAACATTATTCACTTCTTTCTTATTACCACTCTGAACTCATCACTACTGTGGTTTATCTCAAACACTAGTAGTAGTAGTAGTAGTGCACATGCATTGTTGCTAGGAAATGAGAGTGATCATCTGGCTTTGCTCAAGTTCAAGGATTCAATATCCAAGGACCCTTTTGGAGTCTTGGATTCTTGGAATACCACAAACCACTTTTGCAAGTGGCAAGGAATCACATGCAATAATAGTCCCAAGCAACAAAGAGTTATTGAATTGAGGTTACCAGGATATTATCTGCATGGATCTCTGTCTCCTCAACTCAGTAATCTCTCTTTTCTGAGGCACATAGACCTCGAAAACAACAGCTTCTATGGAGATATTCCCCAAGAGCTTGGTCTCTTGTCACACCTGCAGGTACTTTATCTTGATAACAATTCTCTGACTGGTGAAATTCCTATAAACTTGACCAGTTGTTCTGAACTCACAAACTTTGACTTCTCATGGAACAATTTGATTGGTAACATACCAATTGGAATTGGATCTCTTTCCAAGCTCAAAGAATTTTTCATTGAGAGAAATAATTTAAGTGGAAGAATCCCACCATCCATAGGTAATCTTACATCCCTCACTTCCCTAGTGTTGATTTCTAATGACTTGGAGGGGAATATTCCACAACAATTATGTGCCTTGCAAAACTTAACATATTTATTACTCGATTCGAACGAATTTTCCAGTACACTTCCATCTTGTCTTTACAATATATCATCTCTTAGTGTGTTATCAGTTTCAAACAATAATATTAGTGGCTCTTTGCCGGCCAACATTTTCCACAACCTCCCAAATCTTCAATTTTTCCAAATTGGAACAAACAATTTCTCTGGAAAAATTCCACTTTCTGTCACAAATGCATCTTTACTACAAGTACTTGATTTGGATCGAAACCATTTTGTGGGACAAGTTCCAAGCCTAGGGAAGCTAACAAAACTTCGATTTCTGTCTGTATCTGAGAACAATCTAGGTGGATTTCCAACTAAGGATTTGAAGTTCTTGAAGCCTTTGGCCAACTGTAGTAACTTGTACGTGCTTGGCATATCTGTCAATAACTTTGGAGGCCAGTTGCCAAATTACATTGGTAATTTGTCTACACACTTGAGCAATCTCTTTCTTGGTTATAACCAAATATATGGAAAAATTCCTGCGGAGTTAGGAAATTTGGTTAACTTAACTCTCTTGAACATGCAAGGCTGCCGTTTTGATGGGAATATTCCAGCTACTTTTGGACAGTTTCAAAAGATGGAAGTATTAGAGTTGAGTGGAAACAAGTTTTCAGGAGAGATGCCAGCCTTTATAGGCAACCTCAGCAAGTTATTTCTCTTGGATTTGTCAGACAATATGTTTGAAGGAAGCATTCCTTCAAGTATAGGAAACTGCCAGAACTTACAACATCTTAATTTTTCCAAGAACAATCTCAGCAGAACCATACCATCTGAGATTTTCAGCATTTCTTCCTTAACAATCTTATTAGACTTGTCACAAAACTCATTCAGTGGCAATCTATCTGATGAAGTGGGAAAGCTACAAAATCTCAATTTCCTGAAAGTCTCTGAGAATAATCTAGTTGGCAACATTCCTGCCAGCATTGCAGAGTGTCTAAGTTTGGAGTTCCTTTATTTGCAAGGGAATTCATTCTCCGGAGCCATACCATCCTCTTTGGTTTCGCTTAAAGGTCTCCGAAAATTAGACATATCACGAAACCATTTGTCAGGGTCGATTCCTGAAGGATTGCAGAACCTTTCACTTGAGTATCTCAATATCTCTTTCAACATGTTAGATGGAAAAGTGCCGACAGGAGGAGTTTTCAAAAATGTGAGTGAGTTTGCAATGATTGGAAACAATAAGCTTTGTGGGGGTGTTTCAGAGCTTCATTTGCCACCATGCCCTTCTGAAGCTAAGAAACCAAAGAGACACCACAATTTCAAGTTGGTTGTAGTGATAGTTTGTGTGTGTGCTTTTTTCTTCTTCTTATCCCTTCTCCTAACCATTTGCTGGATGAGGAAGAGAAGCAAGAAAATGTCTTCTGATGATTCACCAACAATAGACCAGCTGGCTAAGGTTTCCTATCAAAGCCTACACAATGGAACCAATGGATTCTCAGAAGAAAATTTGATAGGGTCTGGAAGTTTTGGCTCTGTGTATAAGGGAACTCTTGAGTTAGAAGAAAGTGGTGTTGCTGTTGCCATTAAGGTCCTAAAGCTTCAAACCAAAGGTGCTGAGAAGAGTTTTGTTGCTGAATGTAATGCACTCAAGAGTGTGAGGCATCGCAATCTGGTGAAGATTTTAACATGTTGCTCAGGTACAGATTATAAAGGGCAAGAATTCAAGGCTCTAGTTTTTGAGTTCATGACAAATGGAAGCCTAGAAAGTTGGTTACATCCATCAACAGAAATTGCAAATCAAACTGCTGCTAGATCACTGAACCTTGAGCAAAGGTTTAACATCATCAATGATGTTGCCTCAGCATTTCATTATCTTCACTATGAATGCGATCGAGCTATTATTCATCGTGATTTAAAGCCAAGCAATATTCTTCTGGACGATTTGATGGTAGCTCATGTGGGTGATTTTGGCTTAGCAAGACTACTTGAGAAGAATATTGGAGACTCTTCTATGCAAACTACCTCAACTGGACTGAAAGGAACTTTTGGTTATGCTCCTCCAGAGTATGGAATGGGTTATCAAGTGTCCATTGAAGGAGATATGTATAGCTTTGGGATTCTGATATTAGAAATGTTGACTGGAAAGAGGCCCACGGATGAAATATTCATGGACGGTCACAATCTCCATAAATATGTTGAAGTTTCAATTTCAAGTAACATTTTCAAGATTGTGGACCCATGTATCCTTTCCATGGGAGAACAACTACAGCCTGGGGTTGAAAATTGTTTAATTTCACTGTTTAAAGTTGGACTGGCTTGTTCAATGGAATCACCAAATGAAAGAATGACTATGGTTGATTTAATGAGACAGCTTAATCGAATCAAAAGTTGTTTTCCTTATACTCAACTCATGGAAGCAGATCAGAACATTCATAAACTCGTCTGA 3096 0.3844 MKQNIIHFFLITTLNSSLLWFISNTSSSSSSAHALLLGNESDHLALLKFKDSISKDPFGVLDSWNTTNHFCKWQGITCNNSPKQQRVIELRLPGYYLHGSLSPQLSNLSFLRHIDLENNSFYGDIPQELGLLSHLQVLYLDNNSLTGEIPINLTSCSELTNFDFSWNNLIGNIPIGIGSLSKLKEFFIERNNLSGRIPPSIGNLTSLTSLVLISNDLEGNIPQQLCALQNLTYLLLDSNEFSSTLPSCLYNISSLSVLSVSNNNISGSLPANIFHNLPNLQFFQIGTNNFSGKIPLSVTNASLLQVLDLDRNHFVGQVPSLGKLTKLRFLSVSENNLGGFPTKDLKFLKPLANCSNLYVLGISVNNFGGQLPNYIGNLSTHLSNLFLGYNQIYGKIPAELGNLVNLTLLNMQGCRFDGNIPATFGQFQKMEVLELSGNKFSGEMPAFIGNLSKLFLLDLSDNMFEGSIPSSIGNCQNLQHLNFSKNNLSRTIPSEIFSISSLTILLDLSQNSFSGNLSDEVGKLQNLNFLKVSENNLVGNIPASIAECLSLEFLYLQGNSFSGAIPSSLVSLKGLRKLDISRNHLSGSIPEGLQNLSLEYLNISFNMLDGKVPTGGVFKNVSEFAMIGNNKLCGGVSELHLPPCPSEAKKPKRHHNFKLVVVIVCVCAFFFFLSLLLTICWMRKRSKKMSSDDSPTIDQLAKVSYQSLHNGTNGFSEENLIGSGSFGSVYKGTLELEESGVAVAIKVLKLQTKGAEKSFVAECNALKSVRHRNLVKILTCCSGTDYKGQEFKALVFEFMTNGSLESWLHPSTEIANQTAARSLNLEQRFNIINDVASAFHYLHYECDRAIIHRDLKPSNILLDDLMVAHVGDFGLARLLEKNIGDSSMQTTSTGLKGTFGYAPPEYGMGYQVSIEGDMYSFGILILEMLTGKRPTDEIFMDGHNLHKYVEVSISSNIFKIVDPCILSMGEQLQPGVENCLISLFKVGLACSMESPNERMTMVDLMRQLNRIKSCFPYTQLMEADQNIHKLV 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00316 1031 PANTHER OS04G0122200 PROTEIN 227 1012 - -
Arst5g00316 1031 SUPERFAMILY L domain-like 40 337 - -
Arst5g00316 1031 Gene3D Ribonuclease Inhibitor 39 200 IPR032675 -
Arst5g00316 1031 Gene3D Ribonuclease Inhibitor 349 646 IPR032675 -
Arst5g00316 1031 ProSitePatterns Protein kinases ATP-binding region signature. 721 746 IPR017441 GO:0005524
Arst5g00316 1031 SUPERFAMILY Protein kinase-like (PK-like) 696 1008 IPR011009 -
Arst5g00316 1031 FunFam LRR receptor-like serine/threonine-protein kinase EFR 686 798 - -
Arst5g00316 1031 Gene3D Transferase(Phosphotransferase) domain 1 799 1026 - -
Arst5g00316 1031 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 222 318 - -
Arst5g00316 1031 Gene3D Phosphorylase Kinase; domain 1 696 798 - -
Arst5g00316 1031 FunFam LRR receptor-like serine/threonine-protein kinase EFR 343 650 - -
Arst5g00316 1031 ProSitePatterns Serine/Threonine protein kinases active-site signature. 850 862 IPR008271 GO:0004672|GO:0006468
Arst5g00316 1031 SMART LRR_typ_2 324 347 IPR003591 -
Arst5g00316 1031 SMART LRR_typ_2 252 276 IPR003591 -
Arst5g00316 1031 SMART LRR_typ_2 451 475 IPR003591 -
Arst5g00316 1031 SMART LRR_typ_2 180 204 IPR003591 -
Arst5g00316 1031 SMART LRR_typ_2 228 251 IPR003591 -
Arst5g00316 1031 SMART LRR_typ_2 524 548 IPR003591 -
Arst5g00316 1031 SMART LRR_typ_2 476 499 IPR003591 -
Arst5g00316 1031 SMART LRR_typ_2 572 595 IPR003591 -
Arst5g00316 1031 SMART LRR_typ_2 132 156 IPR003591 -
Arst5g00316 1031 SMART serkin_6 715 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00316 1031 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 799 1020 - -
Arst5g00316 1031 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Arst5g00316 1031 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 39 200 - -
Arst5g00316 1031 Pfam Leucine rich repeat 554 608 IPR001611 GO:0005515
Arst5g00316 1031 SUPERFAMILY L domain-like 380 634 - -
Arst5g00316 1031 ProSiteProfiles Protein kinase domain profile. 715 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00316 1031 CDD STKc_IRAK 721 1011 - -
Arst5g00316 1031 Gene3D Ribonuclease Inhibitor 201 348 IPR032675 -
Arst5g00316 1031 Pfam Protein tyrosine and serine/threonine kinase 718 1008 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00316 Arst-Chr5 2588588 2592739 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00316 39 1015 Receptor kinase-like Gene Family AT3G47570 45.335 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Arst5g00316 PK_Tyr_Ser-Thr 1.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00316 - - gmx:100792724 1211.05