Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00315 ATGAAGCAAAACATTATTCACTTCTTTCTTATTACCACTCTGAACTCATCACTACTGTGGTTTATCTCAAACACTAGTAGTAGTAGTAGTAGTGCACATGCATTGTTGCTAGGAAATGAGAGTGATCATCTGGCTTTGCTCAAGTTCAAGGATTCAATATCCAAGGACCCTTTTGGAGTCTTGGATTCTTGGAATACCACAAACCACTTTTGCAAGTGGCAAGGAATCACATGCAATAATAGTCCCAAGCAACAAAGAGTTATTGAATTGAGGTTACCAGGATATTATCTGCATGGATCTCTGTCTCCTCAACTCAGTAATCTCTCTTTTCTGAGGCACATAGACCTCGAAAACAACAGCTTCTATGGAGATATTCCCCAAGAGCTTGGTCTCTTGTCACACCTGCAGGTACTTTATCTTGATAACAATTCTCTGACTGGTGAAATTCCTATAAACTTGACCAGTTGTTCTGAACTCACAAACTTTGACTTCTCATGGAACAATTTGATTGGTAACATACCAATTGGAATTGGATCTCTTTCCAAGCTCAAAGAATTTTTCATTGAGAGAAATAATTTAAGTGGAAGAATCCCACCATCCATAGGTGGATTTCCAACTAAGGATTTGAAGTTCTTGAAGCCTTTGGCCAACTGTAGTAACTTGTACGTGCTTGGCATATCTGTCAATAACTTTGGAGGCCAGTTGCCAAATTACATTGGTAATTTGTCTACACACTTGAGCAATCTCTTTCTTGGTTATAACCAAATATATGGAAAAATTCCTGCGGAGTTAGGAAATTTGGTTAACTTAACTCTCTTGAACATGCAAGGCTGCCGTTTTGATGGGAATATTCCAGCTACTTTTGGACAGTTTCAAAAGATGGAAGTATTAGAGTTGAGTGGAAACAAGTTTTCAGGAGAGATGCCAGCCTTTATAGGCAACCTCAGCAAGTTATTTCTCTTGGATTTGTCAGACAATATGTTTGAAGGAAGCATTCCTTCAAGTATAGGAAACTGCCAGAACTTACAACATCTTAATTTTTCCAAGAACAATCTCAGCAGAACCATACCATCTGAGATTTTCAGCATTTCTTCCTTAACAATCTTATTAGACTTGTCACAAAACTCATTCAGTGGCAATCTATCTGATGAAGTGGGAAAGCTACAAAATCTCAATTTCCTGAAAGTCTCTGAGAATAATCTAGTTGGCAACATTCCTGCCAGCATTGCAGAGTGTCTAAGTTTGGAGTTCCTTTATTTGCAAGGGAATTCATTCTCCGGAGCCATACCATCCTCTTTGGTTTCGCTTAAAGGTCTCCGAAAATTAGACATATCACGAAACCATTTGTCAGGGTCGATTCCTGAAGGATTGCAGAACCTTTCACTTGAGTATCTCAATATCTCTTTCAACATGTTAGATGGAAAAGTGCCGACAGGAGGAGTTTTCAAAAATGTGAGTGAGTTTGCAATGATTGGAAACAATAAGCTTTGTGGGGGTGTTTCAGAGCTTCATTTGCCACCATGCCCTTCTGAAGCTAAGAAACCAAAGAGACACCACAATTTCAAGTTGGTTGTAGTGATAGTTTGTGTGTGTGCTTTTTTCTTCTTCTTATCCCTTCTCCTAACCATTTGCTGGATGAGGAAGAGAAGCAAGAAAATGTCTTCTGATGATTCACCAACAATAGACCAGCTGGCTAAGGTTTCCTATCAAAGCCTACACAATGGAACCAATGGATTCTCAGAAGAAAATTTGATAGGGTCTGGAAGTTTTGGCTCTGTGTATAAGGGAACTCTTGAGTTAGAAGAAAGTGGTGTTGCTGTTGCCATTAAGGTCCTAAAGCTTCAAACCAAAGGTGCTGAGAAGAGTTTTGTTGCTGAATGTAATGCACTCAAGAGTGTGAGGCATCGCAATCTGGTGAAGATTTTAACATGTTGCTCAGGTACAGATTATAAAGGGCAAGAATTCAAGGCTCTAGTTTTTGAGTTCATGACAAATGGAAGCCTAGAAAGTTGGTTACATCCATCAACAGAAATTGCAAATCAAACTGCTGCTAGATCACTGAACCTTGAGCAAAGGTTTAACATCATCAATGATGTTGCCTCAGCATTTCATTATCTTCACTATGAATGCGATCGAGCTATTATTCATCGTGATTTAAAGCCAAGCAATATTCTTCTGGACGATTTGATGGTAGCTCATGTGGGTGATTTTGGCTTAGCAAGACTACTTGAGAAGAATATTGGAGACTCTTCTATGCAAACTACCTCAACTGGACTGAAAGGAACTTTTGGTTATGCTCCTCCAGAGTATGGAATGGGTTATCAAGTGTCCATTGAAGGAGATATGTATAGCTTTGGGATTCTGATATTAGAAATGTTGACTGGAAAGAGGCCCACGGATGAAATATTCATGGACGGTCACAATCTCCATAAATATGTTGAAGTTTCAATTTCAAGTAACATTTTCAAGATTGTGGACCCATGTATCCTTTCCATGGGAGAACAACTACAGCCTGGGGTTGAAAATTGTTTAATTTCACTGTTTAAAGTTGGACTGGCTTGTTCAATGGAATCACCAAATGAAAGAATGACTATGGTTGATTTAATGAGACAGCTTAATCGAATCAAAAGTTGTTTTCCTTATACTCAACTCATGGAAGCAGATCAGAACATTCATAAACTCGTCTGA 2688 0.388 MKQNIIHFFLITTLNSSLLWFISNTSSSSSSAHALLLGNESDHLALLKFKDSISKDPFGVLDSWNTTNHFCKWQGITCNNSPKQQRVIELRLPGYYLHGSLSPQLSNLSFLRHIDLENNSFYGDIPQELGLLSHLQVLYLDNNSLTGEIPINLTSCSELTNFDFSWNNLIGNIPIGIGSLSKLKEFFIERNNLSGRIPPSIGGFPTKDLKFLKPLANCSNLYVLGISVNNFGGQLPNYIGNLSTHLSNLFLGYNQIYGKIPAELGNLVNLTLLNMQGCRFDGNIPATFGQFQKMEVLELSGNKFSGEMPAFIGNLSKLFLLDLSDNMFEGSIPSSIGNCQNLQHLNFSKNNLSRTIPSEIFSISSLTILLDLSQNSFSGNLSDEVGKLQNLNFLKVSENNLVGNIPASIAECLSLEFLYLQGNSFSGAIPSSLVSLKGLRKLDISRNHLSGSIPEGLQNLSLEYLNISFNMLDGKVPTGGVFKNVSEFAMIGNNKLCGGVSELHLPPCPSEAKKPKRHHNFKLVVVIVCVCAFFFFLSLLLTICWMRKRSKKMSSDDSPTIDQLAKVSYQSLHNGTNGFSEENLIGSGSFGSVYKGTLELEESGVAVAIKVLKLQTKGAEKSFVAECNALKSVRHRNLVKILTCCSGTDYKGQEFKALVFEFMTNGSLESWLHPSTEIANQTAARSLNLEQRFNIINDVASAFHYLHYECDRAIIHRDLKPSNILLDDLMVAHVGDFGLARLLEKNIGDSSMQTTSTGLKGTFGYAPPEYGMGYQVSIEGDMYSFGILILEMLTGKRPTDEIFMDGHNLHKYVEVSISSNIFKIVDPCILSMGEQLQPGVENCLISLFKVGLACSMESPNERMTMVDLMRQLNRIKSCFPYTQLMEADQNIHKLV 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00315 895 Pfam Protein tyrosine and serine/threonine kinase 582 872 IPR001245 GO:0004672|GO:0006468
Arst5g00315 895 SUPERFAMILY RNI-like 80 309 - -
Arst5g00315 895 SMART LRR_typ_2 436 459 IPR003591 -
Arst5g00315 895 SMART LRR_typ_2 315 339 IPR003591 -
Arst5g00315 895 SMART LRR_typ_2 180 204 IPR003591 -
Arst5g00315 895 SMART LRR_typ_2 388 412 IPR003591 -
Arst5g00315 895 SMART LRR_typ_2 340 363 IPR003591 -
Arst5g00315 895 SMART LRR_typ_2 132 156 IPR003591 -
Arst5g00315 895 SUPERFAMILY Protein kinase-like (PK-like) 560 872 IPR011009 -
Arst5g00315 895 FunFam LRR receptor-like serine/threonine-protein kinase EFR 207 514 - -
Arst5g00315 895 Gene3D Ribonuclease Inhibitor 207 517 IPR032675 -
Arst5g00315 895 Gene3D Ribonuclease Inhibitor 41 151 IPR032675 -
Arst5g00315 895 Gene3D Ribonuclease Inhibitor 152 206 IPR032675 -
Arst5g00315 895 ProSitePatterns Protein kinases ATP-binding region signature. 585 610 IPR017441 GO:0005524
Arst5g00315 895 ProSiteProfiles Protein kinase domain profile. 579 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00315 895 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 663 884 - -
Arst5g00315 895 Gene3D Phosphorylase Kinase; domain 1 560 662 - -
Arst5g00315 895 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Arst5g00315 895 CDD STKc_IRAK 585 875 - -
Arst5g00315 895 SMART serkin_6 579 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00315 895 Pfam Leucine rich repeat 415 472 IPR001611 GO:0005515
Arst5g00315 895 SUPERFAMILY L domain-like 244 498 - -
Arst5g00315 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 714 726 IPR008271 GO:0004672|GO:0006468
Arst5g00315 895 PANTHER UNNAMED PRODUCT 96 800 - -
Arst5g00315 895 Gene3D Transferase(Phosphotransferase) domain 1 663 890 - -
Arst5g00315 895 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 39 202 - -
Arst5g00315 895 FunFam LRR receptor-like serine/threonine-protein kinase EFR 550 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00315 Arst-Chr5 2588585 2592739 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00315 86 879 Receptor kinase-like Gene Family AT3G47570 44.776 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Arst5g00315 PK_Tyr_Ser-Thr 9.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00315 - - gmx:100792724 895.19