Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00314 ATGAAGCAAAACATTATTCACTTCTTTCTTATTACCACTCTGAACTCATCACTACTGTGGTTTATCTCAAACACTAGTAGTAGTAGTAGTAGTGCACATGCATTGTTGCTAGGAAATGAGAGTGATCATCTGGCTTTGCTCAAGTTCAAGGATTCAATATCCAAGGACCCTTTTGGAGTCTTGGATTCTTGGAATACCACAAACCACTTTTGCAAGTGGCAAGGAATCACATGCAATAATAGTCCCAAGCAACAAAGAGTTATTGAATTGAGGTTACCAGGATATTATCTGCATGGATCTCTGTCTCCTCAACTCAGTAATCTCTCTTTTCTGAGGCACATAGACCTCGAAAACAACAGCTTCTATGGAGATATTCCCCAAGAGCTTGGTCTCTTGTCACACCTGCAGGTACTTTATCTTGATAACAATTCTCTGACTGGTGAAATTCCTATAAACTTGACCAGTTGTTCTGAACTCACAAACTTTGACTTCTCATGGAACAATTTGATTGGTAACATACCAATTGGAATTGGATCTCTTTCCAAGCTCAAAGAATTTTTCATTGAGAGAAATAATTTAAGTGGAAGAATCCCACCATCCATAGGTAATCTTACATCCCTCACTTCCCTAGTGTTGATTTCTAATGACTTGGAGGGGAATATTCCACAACAATTATGTGCCTTGCAAAACTTAACATATTTATTACTCGATTCGAACGAATTTTCCAGTACACTTCCATCTTGTCTTTACAATATATCATCTCTTAGTGTGTTATCAGTTTCAAACAATAATATTAGTGGCTCTTTGCCGGCCAACATTTTCCACAACCTCCCAAATCTTCAATTTTTCCAAATTGGAACAAACAATTTCTCTGGAAAAATTCCACTTTCTGTCACAAATGCATCTTTACTACAAGTACTTGATTTGGATCGAAACCATTTTGTGGGACAAGTTCCAAGCCTAGGGAAGCTAACAAAACTTCGATTTCTGTCTGTATCTGAGAACAATCTAGGTGGATTTCCAACTAAGGATTTGAAGTTCTTGAAGCCTTTGGCCAACTGTAGTAACTTGTACGTGCTTGGCATATCTGTCAATAACTTTGGAGGCCAGTTGCCAAATTACATTGGCTGCCGTTTTGATGGGAATATTCCAGCTACTTTTGGACAGTTTCAAAAGATGGAAGTATTAGAGTTGAGTGGAAACAAGTTTTCAGGAGAGATGCCAGCCTTTATAGGCAACCTCAGCAAGTTATTTCTCTTGGATTTGTCAGACAATATGTTTGAAGGAAGCATTCCTTCAAGTATAGGAAACTGCCAGAACTTACAACATCTTAATTTTTCCAAGAACAATCTCAGCAGAACCATACCATCTGAGATTTTCAGCATTTCTTCCTTAACAATCTTATTAGACTTGTCACAAAACTCATTCAGTGGCAATCTATCTGATGAAGTGGGAAAGCTACAAAATCTCAATTTCCTGAAAGTCTCTGAGAATAATCTAGTTGGCAACATTCCTGCCAGCATTGCAGAGTGTCTAAGTTTGGAGTTCCTTTATTTGCAAGGGAATTCATTCTCCGGAGCCATACCATCCTCTTTGGTTTCGCTTAAAGGTCTCCGAAAATTAGACATATCACGAAACCATTTGTCAGGGTCGATTCCTGAAGGATTGCAGAACCTTTCACTTGAGTATCTCAATATCTCTTTCAACATGTTAGATGGAAAAGTGCCGACAGGAGGAGTTTTCAAAAATGTGAGTGAGTTTGCAATGATTGGAAACAATAAGCTTTGTGGGGGTGTTTCAGAGCTTCATTTGCCACCATGCCCTTCTGAAGCTAAGAAACCAAAGAGACACCACAATTTCAAGTTGGTTGTAGTGATAGTTTGTGTGTGTGCTTTTTTCTTCTTCTTATCCCTTCTCCTAACCATTTGCTGGATGAGGAAGAGAAGCAAGAAAATGTCTTCTGATGATTCACCAACAATAGACCAGCTGGCTAAGGTTTCCTATCAAAGCCTACACAATGGAACCAATGGATTCTCAGAAGAAAATTTGATAGGGTCTGGAAGTTTTGGCTCTGTGTATAAGGGAACTCTTGAGTTAGAAGAAAGTGGTGTTGCTGTTGCCATTAAGGTCCTAAAGCTTCAAACCAAAGGTGCTGAGAAGAGTTTTGTTGCTGAATGTAATGCACTCAAGAGTGTGAGGCATCGCAATCTGGTGAAGATTTTAACATGTTGCTCAGGTACAGATTATAAAGGGCAAGAATTCAAGGCTCTAGTTTTTGAGTTCATGACAAATGGAAGCCTAGAAAGTTGGTTACATCCATCAACAGAAATTGCAAATCAAACTGCTGCTAGATCACTGAACCTTGAGCAAAGGTTTAACATCATCAATGATGTTGCCTCAGCATTTCATTATCTTCACTATGAATGCGATCGAGCTATTATTCATCGTGATTTAAAGCCAAGCAATATTCTTCTGGACGATTTGATGGTAGCTCATGTGGGTGATTTTGGCTTAGCAAGACTACTTGAGAAGAATATTGGAGACTCTTCTATGCAAACTACCTCAACTGGACTGAAAGGAACTTTTGGTTATGCTCCTCCAGAGTATGGAATGGGTTATCAAGTGTCCATTGAAGGAGATATGTATAGCTTTGGGATTCTGATATTAGAAATGTTGACTGGAAAGAGGCCCACGGATGAAATATTCATGGACGGTCACAATCTCCATAAATATGTTGAAGTTTCAATTTCAAGTAACATTTTCAAGATTGTGGACCCATGTATCCTTTCCATGGGAGAACAACTACAGCCTGGGGTTGAAAATTGTTTAATTTCACTGTTTAAAGTTGGACTGGCTTGTTCAATGGAATCACCAAATGAAAGAATGACTATGGTTGATTTAATGAGACAGCTTAATCGAATCAAAAGTTGTTTTCCTTATACTCAACTCATGGAAGCAGATCAGAACATTCATAAACTCGTCTGA 2985 0.3859 MKQNIIHFFLITTLNSSLLWFISNTSSSSSSAHALLLGNESDHLALLKFKDSISKDPFGVLDSWNTTNHFCKWQGITCNNSPKQQRVIELRLPGYYLHGSLSPQLSNLSFLRHIDLENNSFYGDIPQELGLLSHLQVLYLDNNSLTGEIPINLTSCSELTNFDFSWNNLIGNIPIGIGSLSKLKEFFIERNNLSGRIPPSIGNLTSLTSLVLISNDLEGNIPQQLCALQNLTYLLLDSNEFSSTLPSCLYNISSLSVLSVSNNNISGSLPANIFHNLPNLQFFQIGTNNFSGKIPLSVTNASLLQVLDLDRNHFVGQVPSLGKLTKLRFLSVSENNLGGFPTKDLKFLKPLANCSNLYVLGISVNNFGGQLPNYIGCRFDGNIPATFGQFQKMEVLELSGNKFSGEMPAFIGNLSKLFLLDLSDNMFEGSIPSSIGNCQNLQHLNFSKNNLSRTIPSEIFSISSLTILLDLSQNSFSGNLSDEVGKLQNLNFLKVSENNLVGNIPASIAECLSLEFLYLQGNSFSGAIPSSLVSLKGLRKLDISRNHLSGSIPEGLQNLSLEYLNISFNMLDGKVPTGGVFKNVSEFAMIGNNKLCGGVSELHLPPCPSEAKKPKRHHNFKLVVVIVCVCAFFFFLSLLLTICWMRKRSKKMSSDDSPTIDQLAKVSYQSLHNGTNGFSEENLIGSGSFGSVYKGTLELEESGVAVAIKVLKLQTKGAEKSFVAECNALKSVRHRNLVKILTCCSGTDYKGQEFKALVFEFMTNGSLESWLHPSTEIANQTAARSLNLEQRFNIINDVASAFHYLHYECDRAIIHRDLKPSNILLDDLMVAHVGDFGLARLLEKNIGDSSMQTTSTGLKGTFGYAPPEYGMGYQVSIEGDMYSFGILILEMLTGKRPTDEIFMDGHNLHKYVEVSISSNIFKIVDPCILSMGEQLQPGVENCLISLFKVGLACSMESPNERMTMVDLMRQLNRIKSCFPYTQLMEADQNIHKLV 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00314 994 ProSiteProfiles Protein kinase domain profile. 678 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00314 994 FunFam LRR receptor-like serine/threonine-protein kinase EFR 649 761 - -
Arst5g00314 994 Pfam Leucine rich repeat 514 571 IPR001611 GO:0005515
Arst5g00314 994 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 762 983 - -
Arst5g00314 994 Coils Coil 983 994 - -
Arst5g00314 994 Gene3D Ribonuclease Inhibitor 192 276 IPR032675 -
Arst5g00314 994 Gene3D Ribonuclease Inhibitor 38 191 IPR032675 -
Arst5g00314 994 Gene3D Transferase(Phosphotransferase) domain 1 762 989 - -
Arst5g00314 994 ProSitePatterns Protein kinases ATP-binding region signature. 684 709 IPR017441 GO:0005524
Arst5g00314 994 Pfam Protein tyrosine and serine/threonine kinase 681 971 IPR001245 GO:0004672|GO:0006468
Arst5g00314 994 SUPERFAMILY Protein kinase-like (PK-like) 659 971 IPR011009 -
Arst5g00314 994 CDD STKc_IRAK 684 974 - -
Arst5g00314 994 SUPERFAMILY L domain-like 40 337 - -
Arst5g00314 994 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 171 377 - -
Arst5g00314 994 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 251 972 - -
Arst5g00314 994 Gene3D Ribonuclease Inhibitor 377 616 IPR032675 -
Arst5g00314 994 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Arst5g00314 994 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 41 154 - -
Arst5g00314 994 SUPERFAMILY L domain-like 351 597 - -
Arst5g00314 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Arst5g00314 994 SMART LRR_typ_2 414 438 IPR003591 -
Arst5g00314 994 SMART LRR_typ_2 324 347 IPR003591 -
Arst5g00314 994 SMART LRR_typ_2 439 462 IPR003591 -
Arst5g00314 994 SMART LRR_typ_2 252 276 IPR003591 -
Arst5g00314 994 SMART LRR_typ_2 535 558 IPR003591 -
Arst5g00314 994 SMART LRR_typ_2 487 511 IPR003591 -
Arst5g00314 994 SMART LRR_typ_2 180 204 IPR003591 -
Arst5g00314 994 SMART LRR_typ_2 228 251 IPR003591 -
Arst5g00314 994 SMART LRR_typ_2 132 156 IPR003591 -
Arst5g00314 994 Gene3D Phosphorylase Kinase; domain 1 659 761 - -
Arst5g00314 994 FunFam LRR receptor-like serine/threonine-protein kinase EFR 378 613 - -
Arst5g00314 994 Gene3D Ribonuclease Inhibitor 277 376 IPR032675 -
Arst5g00314 994 SMART serkin_6 678 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00314 Arst-Chr5 2588583 2592739 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00314 39 978 Receptor kinase-like Gene Family AT3G47570 43.712 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Arst5g00314 PK_Tyr_Ser-Thr 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00314 - - aprc:113870110 1140.56