Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00313 ATGAAGCAAAACATTATTCACTTCTTTCTTATTACCACTCTGAACTCATCACTACTGTGGTTTATCTCAAACACTAGTAGTAGTAGTAGTAGTGCACATGCATTGTTGCTAGGAAATGAGAGTGATCATCTGGCTTTGCTCAAGTTCAAGGATTCAATATCCAAGGACCCTTTTGGAGTCTTGGATTCTTGGAATACCACAAACCACTTTTGCAAGTGGCAAGGAATCACATGCAATAATAGTCCCAAGCAACAAAGAGTTATTGAATTGAGGTTACCAGGATATTATCTGCATGGATCTCTGTCTCCTCAACTCAGTAATCTCTCTTTTCTGAGGCACATAGACCTCGAAAACAACAGCTTCTATGGAGATATTCCCCAAGAGCTTGGTCTCTTGTCACACCTGCAGGTACTTTATCTTGATAACAATTCTCTGACTGGTGAAATTCCTATAAACTTGACCAGTTGTTCTGAACTCACAAACTTTGACTTCTCATGGAACAATTTGATTGGTAACATACCAATTGGAATTGGATCTCTTTCCAAGCTCAAAGAATTTTTCATTGAGAGAAATAATTTAAGTGGAAGAATCCCACCATCCATAGGTGGATTTCCAACTAAGGATTTGAAGTTCTTGAAGCCTTTGGCCAACTGTAGTAACTTGTACGTGCTTGGCATATCTGTCAATAACTTTGGAGGCCAGTTGCCAAATTACATTGGCTGCCGTTTTGATGGGAATATTCCAGCTACTTTTGGACAGTTTCAAAAGATGGAAGTATTAGAGTTGAGTGGAAACAAGTTTTCAGGAGAGATGCCAGCCTTTATAGGCAACCTCAGCAAGTTATTTCTCTTGGATTTGTCAGACAATATGTTTGAAGGAAGCATTCCTTCAAGTATAGGAAACTGCCAGAACTTACAACATCTTAATTTTTCCAAGAACAATCTCAGCAGAACCATACCATCTGAGATTTTCAGCATTTCTTCCTTAACAATCTTATTAGACTTGTCACAAAACTCATTCAGTGGCAATCTATCTGATGAAGTGGGAAAGCTACAAAATCTCAATTTCCTGAAAGTCTCTGAGAATAATCTAGTTGGCAACATTCCTGCCAGCATTGCAGAGTGTCTAAGTTTGGAGTTCCTTTATTTGCAAGGGAATTCATTCTCCGGAGCCATACCATCCTCTTTGGTTTCGCTTAAAGGTCTCCGAAAATTAGACATATCACGAAACCATTTGTCAGGGTCGATTCCTGAAGGATTGCAGAACCTTTCACTTGAGTATCTCAATATCTCTTTCAACATGTTAGATGGAAAAGTGCCGACAGGAGGAGTTTTCAAAAATGTGAGTGAGTTTGCAATGATTGGAAACAATAAGCTTTGTGGGGGTGTTTCAGAGCTTCATTTGCCACCATGCCCTTCTGAAGCTAAGAAACCAAAGAGACACCACAATTTCAAGTTGGTTGTAGTGATAGTTTGTGTGTGTGCTTTTTTCTTCTTCTTATCCCTTCTCCTAACCATTTGCTGGATGAGGAAGAGAAGCAAGAAAATGTCTTCTGATGATTCACCAACAATAGACCAGCTGGCTAAGGTTTCCTATCAAAGCCTACACAATGGAACCAATGGATTCTCAGAAGAAAATTTGATAGGGTCTGGAAGTTTTGGCTCTGTGTATAAGGGAACTCTTGAGTTAGAAGAAAGTGGTGTTGCTGTTGCCATTAAGGTCCTAAAGCTTCAAACCAAAGGTGCTGAGAAGAGTTTTGTTGCTGAATGTAATGCACTCAAGAGTGTGAGGCATCGCAATCTGGTGAAGATTTTAACATGTTGCTCAGGTACAGATTATAAAGGGCAAGAATTCAAGGCTCTAGTTTTTGAGTTCATGACAAATGGAAGCCTAGAAAGTTGGTTACATCCATCAACAGAAATTGCAAATCAAACTGCTGCTAGATCACTGAACCTTGAGCAAAGGTTTAACATCATCAATGATGTTGCCTCAGCATTTCATTATCTTCACTATGAATGCGATCGAGCTATTATTCATCGTGATTTAAAGCCAAGCAATATTCTTCTGGACGATTTGATGGTAGCTCATGTGGGTGATTTTGGCTTAGCAAGACTACTTGAGAAGAATATTGGAGACTCTTCTATGCAAACTACCTCAACTGGACTGAAAGGAACTTTTGGTTATGCTCCTCCAGAGTATGGAATGGGTTATCAAGTGTCCATTGAAGGAGATATGTATAGCTTTGGGATTCTGATATTAGAAATGTTGACTGGAAAGAGGCCCACGGATGAAATATTCATGGACGGTCACAATCTCCATAAATATGTTGAAGTTTCAATTTCAAGTAACATTTTCAAGATTGTGGACCCATGTATCCTTTCCATGGGAGAACAACTACAGCCTGGGGTTGAAAATTGTTTAATTTCACTGTTTAAAGTTGGACTGGCTTGTTCAATGGAATCACCAAATGAAAGAATGACTATGGTTGATTTAATGAGACAGCTTAATCGAATCAAAAGTTGTTTTCCTTATACTCAACTCATGGAAGCAGATCAGAACATTCATAAACTCGTCTGA 2577 0.39 MKQNIIHFFLITTLNSSLLWFISNTSSSSSSAHALLLGNESDHLALLKFKDSISKDPFGVLDSWNTTNHFCKWQGITCNNSPKQQRVIELRLPGYYLHGSLSPQLSNLSFLRHIDLENNSFYGDIPQELGLLSHLQVLYLDNNSLTGEIPINLTSCSELTNFDFSWNNLIGNIPIGIGSLSKLKEFFIERNNLSGRIPPSIGGFPTKDLKFLKPLANCSNLYVLGISVNNFGGQLPNYIGCRFDGNIPATFGQFQKMEVLELSGNKFSGEMPAFIGNLSKLFLLDLSDNMFEGSIPSSIGNCQNLQHLNFSKNNLSRTIPSEIFSISSLTILLDLSQNSFSGNLSDEVGKLQNLNFLKVSENNLVGNIPASIAECLSLEFLYLQGNSFSGAIPSSLVSLKGLRKLDISRNHLSGSIPEGLQNLSLEYLNISFNMLDGKVPTGGVFKNVSEFAMIGNNKLCGGVSELHLPPCPSEAKKPKRHHNFKLVVVIVCVCAFFFFLSLLLTICWMRKRSKKMSSDDSPTIDQLAKVSYQSLHNGTNGFSEENLIGSGSFGSVYKGTLELEESGVAVAIKVLKLQTKGAEKSFVAECNALKSVRHRNLVKILTCCSGTDYKGQEFKALVFEFMTNGSLESWLHPSTEIANQTAARSLNLEQRFNIINDVASAFHYLHYECDRAIIHRDLKPSNILLDDLMVAHVGDFGLARLLEKNIGDSSMQTTSTGLKGTFGYAPPEYGMGYQVSIEGDMYSFGILILEMLTGKRPTDEIFMDGHNLHKYVEVSISSNIFKIVDPCILSMGEQLQPGVENCLISLFKVGLACSMESPNERMTMVDLMRQLNRIKSCFPYTQLMEADQNIHKLV 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00313 858 Gene3D Ribonuclease Inhibitor 210 480 IPR032675 -
Arst5g00313 858 Gene3D Transferase(Phosphotransferase) domain 1 626 853 - -
Arst5g00313 858 SMART LRR_typ_2 303 326 IPR003591 -
Arst5g00313 858 SMART LRR_typ_2 351 375 IPR003591 -
Arst5g00313 858 SMART LRR_typ_2 399 422 IPR003591 -
Arst5g00313 858 SMART LRR_typ_2 180 204 IPR003591 -
Arst5g00313 858 SMART LRR_typ_2 278 302 IPR003591 -
Arst5g00313 858 SMART LRR_typ_2 132 156 IPR003591 -
Arst5g00313 858 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Arst5g00313 858 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 626 847 - -
Arst5g00313 858 ProSiteProfiles Protein kinase domain profile. 542 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00313 858 Gene3D Phosphorylase Kinase; domain 1 523 625 - -
Arst5g00313 858 Gene3D Ribonuclease Inhibitor 41 151 IPR032675 -
Arst5g00313 858 Gene3D Ribonuclease Inhibitor 152 209 IPR032675 -
Arst5g00313 858 SUPERFAMILY Protein kinase-like (PK-like) 523 835 IPR011009 -
Arst5g00313 858 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 39 202 - -
Arst5g00313 858 Pfam Protein tyrosine and serine/threonine kinase 545 835 IPR001245 GO:0004672|GO:0006468
Arst5g00313 858 ProSitePatterns Protein kinases ATP-binding region signature. 548 573 IPR017441 GO:0005524
Arst5g00313 858 SUPERFAMILY L domain-like 40 206 - -
Arst5g00313 858 Pfam Leucine rich repeat 378 435 IPR001611 GO:0005515
Arst5g00313 858 PANTHER OS04G0122200 PROTEIN 112 240 - -
Arst5g00313 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Arst5g00313 858 FunFam LRR receptor-like serine/threonine-protein kinase EFR 513 625 - -
Arst5g00313 858 SMART serkin_6 542 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00313 858 CDD STKc_IRAK 548 838 - -
Arst5g00313 858 FunFam LRR receptor-like serine/threonine-protein kinase EFR 240 477 - -
Arst5g00313 858 SUPERFAMILY L domain-like 215 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00313 Arst-Chr5 2588580 2592739 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00313 86 842 Receptor kinase-like Gene Family AT3G47570 42.786 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Arst5g00313 PK_Tyr_Ser-Thr 9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00313 - - aprc:113870110 839.721