Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00312 ATGAAGTCCATCAACGACTATGCTTCCGCACAAGATCTCGACCCTCAAAGCGACCGCAGCTCCGATTACCTTCTTACTTCTAACCCTCAGCGCCGCCGTCCCCGCGGCTTCGCCAATCCCGCCGCCAAGGGTAAGAAGGAGAGGGAGAAGGAGAAGGAACGGACCAAGCTCCGCGAGCGTCACCGCCGTGCCATCACTAGCCGTATGGTTGCCGGTCTCCGGCAGTACGGGAACTTCCCTCTCCCGGCGTGTGCTGACATGAACGACGTACTCGCTGCACTCGCGCGTGACCCCGGTTGGGTTGTTGAAGCTGATGGCACCACCTATCGGCAATGCCCTCCACCTTCTCACGTGGGATCTTTTGCAGCTAGGTCAGTTGAAAGTCAACTCTCTGGTGGTTCCTTGAGACCTTGCTCTGTTAAAGAGACACTAGGGAATCAGCCACCGGCACTTAGAATTGATGAATGCTTGTCGCCTGCGTCGATAGATTCTGTGGTAATTGCAGAAAGGGACTCGAAGAACGAGAAATACACAAGTGCAAGCCCTGTAAATGTAGTCCACTGTTTGGAGGCCGATCAGCTCATACATGATATCCATTCTGGTGTGCACGAGAATGACTTTACCTGCACACCATATGTTCCGGTTTACTCAAAGCTACCAGCTGGTATTATTAACAAATTTTGCCAGTTGATTGACCCTGAAGGCATTAGACAGGAGCTAATCCATCTTAAGTCTTTAAATATGGATGGCGTCATTGTGGATTGTTGGTGGGGTATTGTTGAAGGCTGGAATCCGCAGAAATATGTGTGGTCTGGCTATAGGGATCTTTTTAGCATTATTAGAGAATTTAAGCTGAAGTTACAGGTTGTTATGGCATTTCATGAATGTGGAGGGAATGGTTCTAGTGATGCATTGATTGCCCTGCCACAATGGGTTTTGGATATGGGAAAAGATAACCCGGATATATTCTTTACAGATCGTGAAGGGCGGAGGAATACTGAATGCCTTTCCTGGGGAATTGACAAAGAGCGTGTTCTGAAAGGAAGAACTGGAATTGAGGTCTATTTTGATATGATGAGAAGCTTCAGGACAGAGTTTGATGACCTGTTTGCAGAAGGTCTGATTTCTGCAGTAGAAATTGGACTTGGTGCATCTGGGGAGCTGAAATACCCTTCTTTTTCAGAAAGGATGGGATGGAGGTATCCTGGAATAGGCGAGTTTCAGTGCTATGATAAATACCTGCAACATAGTCTGCGCATGGCAGCCAAATTACGTGGTCGTTCTTTCTGGGCTAGAGGACCTGATAATGCTGGACACTACAACTCTATGCCACATGAAACTGGATTCTTTTGTGAACGAGGTGATTATGACAACTATTATGGACGCTTCTTCTTACATTGGTATTCCCAGACATTAATAGACCATGCAGATAATGTTCTGTCCCTTGCAAGCCTTGCTTTTGAGGATACAAAATTAGTTGTCAAGGTTCCTGCTGTATACTGGTGGTATAAGACTCCTAGTCATGCAGCAGAGTTGACAGCCGGATATCACAACCCCACGAATCAGGATGGATACTCTCCTGTGTTTGAGATCTTGAGAAAACATTCTGTCACCATGAAATTTGTCTGTGTAGGATTTCATCTTTCCAACCAGGAAGCTAATGAATCATTAATTGATCCAGAGGGTTTAAGTTGGCAGGTACTAAACTCAGCTTGGGATCGAGGTTTGGTTACTGCTGGAGAGAATGCTCCTCTTTGCTATGATAGAGAAGGTTACAAGAGATTAGTTGAGATGGCCAAGCCCAGCAATGATCCAGATCGCCGGCACTTCTCGTTCTTTGTTGTCCGACAACCATCTATGCTTCAAGGAAATGTTTGCCTGTCGGAATTGGATTTCTTCGTTAAATCCATGCACGGTGAGATTACAGGAGCCATATAA 1938 0.4639 MKSINDYASAQDLDPQSDRSSDYLLTSNPQRRRPRGFANPAAKGKKEREKEKERTKLRERHRRAITSRMVAGLRQYGNFPLPACADMNDVLAALARDPGWVVEADGTTYRQCPPPSHVGSFAARSVESQLSGGSLRPCSVKETLGNQPPALRIDECLSPASIDSVVIAERDSKNEKYTSASPVNVVHCLEADQLIHDIHSGVHENDFTCTPYVPVYSKLPAGIINKFCQLIDPEGIRQELIHLKSLNMDGVIVDCWWGIVEGWNPQKYVWSGYRDLFSIIREFKLKLQVVMAFHECGGNGSSDALIALPQWVLDMGKDNPDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFAEGLISAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQHSLRMAAKLRGRSFWARGPDNAGHYNSMPHETGFFCERGDYDNYYGRFFLHWYSQTLIDHADNVLSLASLAFEDTKLVVKVPAVYWWYKTPSHAAELTAGYHNPTNQDGYSPVFEILRKHSVTMKFVCVGFHLSNQEANESLIDPEGLSWQVLNSAWDRGLVTAGENAPLCYDREGYKRLVEMAKPSNDPDRRHFSFFVVRQPSMLQGNVCLSELDFFVKSMHGEITGAI 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00312 645 MobiDBLite consensus disorder prediction 40 63 - -
Arst5g00312 645 Gene3D Glycosidases 203 643 - -
Arst5g00312 645 MobiDBLite consensus disorder prediction 1 63 - -
Arst5g00312 645 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 525 548 IPR001554 GO:0000272|GO:0016161
Arst5g00312 645 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 247 261 IPR001554 GO:0000272|GO:0016161
Arst5g00312 645 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 490 506 IPR001554 GO:0000272|GO:0016161
Arst5g00312 645 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 563 585 IPR001554 GO:0000272|GO:0016161
Arst5g00312 645 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 456 475 IPR001554 GO:0000272|GO:0016161
Arst5g00312 645 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 290 311 IPR001554 GO:0000272|GO:0016161
Arst5g00312 645 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 507 518 IPR001554 GO:0000272|GO:0016161
Arst5g00312 645 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 268 286 IPR001554 GO:0000272|GO:0016161
Arst5g00312 645 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 383 405 IPR001554 GO:0000272|GO:0016161
Arst5g00312 645 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 153 639 IPR001554 GO:0000272|GO:0016161
Arst5g00312 645 Pfam BES1/BZR1 plant transcription factor, N-terminal 43 189 IPR008540 -
Arst5g00312 645 Pfam Glycosyl hydrolase family 14 232 605 IPR001554 GO:0000272|GO:0016161
Arst5g00312 645 MobiDBLite consensus disorder prediction 1 28 - -
Arst5g00312 645 SUPERFAMILY (Trans)glycosidases 207 640 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00312 Arst-Chr5 2588078 2606839 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00312 55 641 Glycoside Hydrolase AT5G45300 69.440 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Arst5g00312 Glyco_hydro_14 4e-85 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00312 K01177 - gmx:100777004 1169.07