Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00311 ATGAAGCAATACATTATTCACTTCTTTCTTATTACCACTTTGAACTCATCACTACTGTGGTTTATCTCAAACACTACTAGTAGTAGTAGTTCCCACGCATTGTTGCTAGGAAATGAGAGTGATCATCTGGCTTTGCTCAAGTTCAAGGATTCAATATCCAAGGACCCTTTTGGAGTCTTGGATTCTTGGAATACCACAAACCACTTTTGCAAGTGGCAAGGAATCACATGCAATAATAGTCCCAAGCAACAAAGAGTTATTGAATTGAGATTACCAGGATATTATCTGCATGGATCTCTGTCTCCTCAACTCAGTAATCTCTCTTTTCTGAGGCACATAAACCTCGAAAACAACAGCTTCTATGGAGATATTCCCCAAGAGCTTGGTCTCTTGTCACACCTGCAGGTACTTTATCTTGATAACAATTCTCTGACTGGTGAAATTCCTATAAACTTGACCAGTTGTTCTGAACTCACATACTTTGACTTCTCATGGAACAATTTGATTGGTAACATACCAATTGAAATTGGATCTCTTTCCAAGCTCAAAGAACTTTTCATTGAGAGCAATAATTTCAGTGGAAGAATCCCACCATCCATAGGTAATCTTACATCCCTCACTTCCCTAGTGTTGCTTTCTAATCACTTGGAGGGGAATATTCCACAAGAATTATGTGCCTTGCAAAACTTGACATATTTATTACTCGATTCGAACAAATTTTCCAGTACACTTCCGTCTTGTCTTTACAATATGTCATCTCTTAGTGTGTTATCGGTTTCATACAATAACATTGGTGGCTCTTTGCCAGCCAACATGTTTCACAACCTTCCCATTCTTCAATTTTTTCAAATTGGAAAGAATAATTTCTCTGGCACAATTCCGGTTTCTGTCACAAATGCATCTTCACTACAAGTACTTGATATTGCCTACAACAATTTTGTGGGACAAGTTCCAAGCCTAGGGAAGCTCACAAAACTCCGACTTCTAACTGTATCTGAGAACAATCTAGGTGGATTTCCAACTAAGGATTTGAAGTTCTTGAAACCATTGGCCAACTGTAGTAACTTGTACGTTCTTAGCATATCTTTCAATAACTTTGGAGGCCAGTTGCCAAATTACATTGGTAATTTGTCTACACATTTGAGCAGTCTCTATCTTGGTTATACCCAAATATATGGAAAAATTCCTAGAGAGTTAGGAAATCTGGTTAACTTAACTCTCTTGCACATGCAACATTGCCGTTTTAATGGGAATATTCCAACTACTTTTGGAAGGTTTCAAAACATTAGAGCATTAGTGTTGAGTGAAAACGAGCTCTTAGGAGACATTCCAGCCTTTATAGGCAACCTCAGCCAGTTGTTTTACTTGGATTTGTCAGACAATATGTTTGAAGGAAGCATTCCTTCAAGTATAGGAAACTGCCAGAACTTACAACATCTTAGTTTTTTCAAGAACAATCTCAGCGGAACCATACCATCTGAGATTTTCAGCATTTCTTCATTAACAACCTTATTAGACTTGTCACAAAACTCATTCAGTGGCAATCTATCTGATGAAGTGGGAAAGCTACAAAATCTCAATTTCCTGAATCTCTCTGAGAATAATCTAGTTGGCAACATTCCTGCCAGCGTTGCAAAGTGCTTAAGTTTGGAGTTCCTTTATTTGCAAGGGAATTCATTCTCCGGAACCATACCATCCTCTTTTGTTTCGTTTAAAGGTCTCCGAGAATTAGACATATCACGAAACCATTTGTCAGGGTCGATTCCTGAAGGATTGCAGAACCTTTCACTTGAGTATCTCAATATCTCTTTCAACATGTTAGATGGAAAAGTGCCGACAGGAGGAGTTTTCAAAAATGTGAGTGAGTTTGCAATGATTGGAAACAATAAGCTTTGTGGGGGTGTTTCAGAGCTTCATTTGCCACCATGCCCTTCTGAAGCTAAGAAACCAAAGAGACACCACAATTTCAAGTTGGTTGTAGTGATAGTTTGTGTGTGTGCTTTTTTCTTCTTCTTATCCCTTCTCCTAACCATTTGCTGGATGAGGAAGAGAAGCAAGAAAATGTCTTCTGATGATTCACCAACAATTGACCAGCTGGCTAAGGTTTCCTATCAAAGCCTACACAACGGAACAAATGGATTCTCAGAAGAAAATTTGATAGGGTCTGGAAGTTTTGGCTCTGTGTATAAGGGAACTCTTGAGTTAGAAGAAAGTGGTGTTGCTGTTGCCATTAAGGTCCTAAAGCTTCAAACCAAAGGTGCTGAGAAGAGTTTTGTTGCTGAATGTAATGCACTCAAGAATGTTAGGCATCGCAATCTGGTGAAGATTATAACATGTTGCTCAGGTACAGATTATAAAGGGCAAGAATTCAAGGCTCTAGTTTTTGAGTTCATGACAAATGGAAGCCTAGAAAGTTGGTTACATCCATCAACAGGAATTGCAAATCAAAGTGCTGCTAGATCACTGAACCTTGAGCAAAGGTTTAACATCATCAATGATGTTGCCTCAGCATTTCATTATCTTCACTATGAATGCGATCGAGCTATTATTCATCGTGATTTAAAGCCAAGCAATATTCTTCTGGACGATTTGATGGTAGCTCATGTGGGTGATTTTGGCTTAGCAAGACTACTTGAGAAGAATATTGGAGACTCTTCTATGCAAACTACCTCAACTGGACTTAAAGGAACTTTTGGTTATGCTCCTCCAGAGTATGGAATGGGTTATCAAGTGTCTATGGAAGGAGATATGTATAGCTTTGGGATTCTGATATTAGAAATGTTGACTGGAAAGAGGCCCACGGATGAAATGTTCATGGACGGTCACAATCTCCATAAATATGTTGAAGTTTCAATTTCAAGTAACATTTTCAAGATTGTGGACCCTTGTATCCTTTCCATGGAAGAACAATTACAGCCTGGGGTTGAAAATTGTTTAATTTCACTGTTTAAAGTTGGACTGGCTTGTTCAATGGAATCACCAAATGAAAGAATGGCTATAGTTGATTTAATGAGAGAGCTTAATCGAATCAAATGTTGTTTTCCTTCGTAA 3051 0.3838 MKQYIIHFFLITTLNSSLLWFISNTTSSSSSHALLLGNESDHLALLKFKDSISKDPFGVLDSWNTTNHFCKWQGITCNNSPKQQRVIELRLPGYYLHGSLSPQLSNLSFLRHINLENNSFYGDIPQELGLLSHLQVLYLDNNSLTGEIPINLTSCSELTYFDFSWNNLIGNIPIEIGSLSKLKELFIESNNFSGRIPPSIGNLTSLTSLVLLSNHLEGNIPQELCALQNLTYLLLDSNKFSSTLPSCLYNMSSLSVLSVSYNNIGGSLPANMFHNLPILQFFQIGKNNFSGTIPVSVTNASSLQVLDIAYNNFVGQVPSLGKLTKLRLLTVSENNLGGFPTKDLKFLKPLANCSNLYVLSISFNNFGGQLPNYIGNLSTHLSSLYLGYTQIYGKIPRELGNLVNLTLLHMQHCRFNGNIPTTFGRFQNIRALVLSENELLGDIPAFIGNLSQLFYLDLSDNMFEGSIPSSIGNCQNLQHLSFFKNNLSGTIPSEIFSISSLTTLLDLSQNSFSGNLSDEVGKLQNLNFLNLSENNLVGNIPASVAKCLSLEFLYLQGNSFSGTIPSSFVSFKGLRELDISRNHLSGSIPEGLQNLSLEYLNISFNMLDGKVPTGGVFKNVSEFAMIGNNKLCGGVSELHLPPCPSEAKKPKRHHNFKLVVVIVCVCAFFFFLSLLLTICWMRKRSKKMSSDDSPTIDQLAKVSYQSLHNGTNGFSEENLIGSGSFGSVYKGTLELEESGVAVAIKVLKLQTKGAEKSFVAECNALKNVRHRNLVKIITCCSGTDYKGQEFKALVFEFMTNGSLESWLHPSTGIANQSAARSLNLEQRFNIINDVASAFHYLHYECDRAIIHRDLKPSNILLDDLMVAHVGDFGLARLLEKNIGDSSMQTTSTGLKGTFGYAPPEYGMGYQVSMEGDMYSFGILILEMLTGKRPTDEMFMDGHNLHKYVEVSISSNIFKIVDPCILSMEEQLQPGVENCLISLFKVGLACSMESPNERMAIVDLMRELNRIKCCFPS 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00311 1016 Gene3D Ribonuclease Inhibitor 153 203 IPR032675 -
Arst5g00311 1016 Gene3D Ribonuclease Inhibitor 40 152 IPR032675 -
Arst5g00311 1016 SMART LRR_typ_2 523 547 IPR003591 -
Arst5g00311 1016 SMART LRR_typ_2 251 275 IPR003591 -
Arst5g00311 1016 SMART LRR_typ_2 450 474 IPR003591 -
Arst5g00311 1016 SMART LRR_typ_2 323 346 IPR003591 -
Arst5g00311 1016 SMART LRR_typ_2 227 250 IPR003591 -
Arst5g00311 1016 SMART LRR_typ_2 571 594 IPR003591 -
Arst5g00311 1016 SMART LRR_typ_2 131 155 IPR003591 -
Arst5g00311 1016 SMART LRR_typ_2 179 203 IPR003591 -
Arst5g00311 1016 FunFam LRR receptor-like serine/threonine-protein kinase EFR 342 649 - -
Arst5g00311 1016 PANTHER OS04G0122200 PROTEIN 226 1011 - -
Arst5g00311 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 849 861 IPR008271 GO:0004672|GO:0006468
Arst5g00311 1016 Gene3D Transferase(Phosphotransferase) domain 1 798 1013 - -
Arst5g00311 1016 FunFam LRR receptor-like serine/threonine-protein kinase EFR 685 797 - -
Arst5g00311 1016 SUPERFAMILY Protein kinase-like (PK-like) 695 1007 IPR011009 -
Arst5g00311 1016 CDD STKc_IRAK 720 1010 - -
Arst5g00311 1016 SUPERFAMILY L domain-like 379 633 - -
Arst5g00311 1016 ProSitePatterns Protein kinases ATP-binding region signature. 720 745 IPR017441 GO:0005524
Arst5g00311 1016 Pfam Leucine rich repeat 229 288 IPR001611 GO:0005515
Arst5g00311 1016 Pfam Leucine rich repeat 550 607 IPR001611 GO:0005515
Arst5g00311 1016 Pfam Leucine Rich Repeat 181 203 IPR001611 GO:0005515
Arst5g00311 1016 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 38 197 - -
Arst5g00311 1016 Gene3D Ribonuclease Inhibitor 204 346 IPR032675 -
Arst5g00311 1016 Pfam Leucine rich repeat N-terminal domain 39 78 IPR013210 -
Arst5g00311 1016 SUPERFAMILY L domain-like 39 336 - -
Arst5g00311 1016 Pfam Protein tyrosine and serine/threonine kinase 717 947 IPR001245 GO:0004672|GO:0006468
Arst5g00311 1016 Gene3D Phosphorylase Kinase; domain 1 695 797 - -
Arst5g00311 1016 Gene3D Ribonuclease Inhibitor 347 645 IPR032675 -
Arst5g00311 1016 FunFam Leucine-rich repeat receptor protein kinase EMS1 198 294 - -
Arst5g00311 1016 ProSiteProfiles Protein kinase domain profile. 714 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00311 1016 SMART serkin_6 714 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00311 1016 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 798 1015 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00311 Arst-Chr5 2568056 2572301 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00311 38 1014 Receptor kinase-like Gene Family AT3G47570 45.842 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Arst5g00311 PK_Tyr_Ser-Thr 3.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00311 - - gmx:100792724 1210.28