Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00282 ATGAACAGCATTGCTATGGGCATTTGTCTGATGAAACGGCAATGGCCATGGCTTCTTTGTGTTCTGCTGCTACACCTTATGATGAAAAAATACGAAGCAATCAGTCCTGATGGTGAGGTTCTTAACAACTTCAGGCTATCAGTTGCTAGCTCAGATGGCGTCCTCTTACAATGGAGACCCGAGGATCCTGATCCATGTAAATGGAATGGAGTGAAGTGCGATCCCAAGACCAAAAGAGTTACACATCTCGCTCTTCACAGCAACAACTTCTATGGCACAATTCCATCAGAATTGGGAAACTGCACTGAATTGCAGGGAATCTTTTTACAGGGTAATTACCTTAGTGGAGTGATTCCAAGTGAAATAGGAAATCTCTCACAGCTCCAAAATTTGGACATATCAAGCAACTCGCTTAGTGGGAATATCCCAGCATCACTTGGGAGGTTGTATAATCTCAAATATTTTAATGTATCTACCAATTTTCTGGTTGGGCCAATACCTGCTGACGGTGTCCTTGCCAATTTTACTGGAAGCTCCTTTGTTGGAAATCGTGGTTTGTGTGGGGTTCAACTCAATTCAACATGTAAAGCTGATGGTTCGCCTGGGACAAATATTCAATCTAATTCTTCAGACCAAAATCAAAATGGAAAGAAGAAATATTCTGGCAGGCTGCTCATCAGTGCATCAGCAACTGTGGGTGCACTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGTTTTCTTTATAAGAAATTTGGTAAAACTGACAAAATAAGTCTTGCAATGGATGTTAGTGGAGGTGCATCAATTGTCATGTTCCATGGTGACCTACCGTATTCTTCGAAAGACATTATTAAGAAACTTGAAACTTTAAATGAGGAACACATAATAGGGATAGGGGGGTTTGGAACTGTTTACAAGCTTGCAATGGATGATGGGAATGTATTTGCCTTGAAAAGAATAGTAAAGTTGAATGAGGGCTTTGACCGGTTTTTTGAGAGGGAGCTTGAAATTCTTGGTAGCATCAAACACCGTCATCTAGTGAACTTACGTGGATATTGCAATTCACCTACATCAAAGTTGTTAATATATGACTACCTACCTGGTGGTAGTCTTGACGAAGCTCTTCATGAAAGATCCGAGCAACTTGACTGGGATTCACGCTTGAATATAATTATGGGAGCTGCAAAAGGGCTTGCCTACTTGCATCATGATTGTTCACCTAGGATCATACATCGAGACATAAAATCAAGTAACATTTTGCTTGATGGAAATTTGGATGCCCGAGTCTCTGATTTTGGACTAGCCAAACTTTTGGAGGATGAAGAATCCCACATCACCACGATTGTTGCTGGAACGTTTGGTTATCTAGCTCCTGAGTATATGCAAAGTGGTAGAGCAACTGAGAAGACTGATGTCTATAGTTTTGGTGTGTTGACACTTGAAGTGCTAAGTGGAAAGCGGCCGACAGACGCTTCATTCATTGAAAAGGGTCTCAATATTGTTGGCTGGCTGAATTTTCTTATTACTGAAAATAGGCGGAGGGAAATAGTTGATCCGCATTGCGAAGGGATACAGGTTGAGAGCCTTGACGCCTTGCTCTCTGTGGCTATTCAATGCATTTCGTCGAGTCCAGAGGATCGACCAACGATGCACCGAGTTGTACAGTTGCTTGAATCGGAGGTCTTGACTCCATGCCCAAGTGATTTCTATGACTCCGAGTAG 1725 0.4214 MNSIAMGICLMKRQWPWLLCVLLLHLMMKKYEAISPDGEVLNNFRLSVASSDGVLLQWRPEDPDPCKWNGVKCDPKTKRVTHLALHSNNFYGTIPSELGNCTELQGIFLQGNYLSGVIPSEIGNLSQLQNLDISSNSLSGNIPASLGRLYNLKYFNVSTNFLVGPIPADGVLANFTGSSFVGNRGLCGVQLNSTCKADGSPGTNIQSNSSDQNQNGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKTDKISLAMDVSGGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGIGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRHLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHERSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLTLEVLSGKRPTDASFIEKGLNIVGWLNFLITENRRREIVDPHCEGIQVESLDALLSVAIQCISSSPEDRPTMHRVVQLLESEVLTPCPSDFYDSE 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00282 574 ProSitePatterns Protein kinases ATP-binding region signature. 297 323 IPR017441 GO:0005524
Arst5g00282 574 Gene3D Phosphorylase Kinase; domain 1 264 366 - -
Arst5g00282 574 SUPERFAMILY L domain-like 36 169 - -
Arst5g00282 574 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 76 559 - -
Arst5g00282 574 SUPERFAMILY Protein kinase-like (PK-like) 274 558 IPR011009 -
Arst5g00282 574 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 265 366 - -
Arst5g00282 574 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Arst5g00282 574 Gene3D Ribonuclease Inhibitor 34 85 IPR032675 -
Arst5g00282 574 Gene3D Ribonuclease Inhibitor 86 201 IPR032675 -
Arst5g00282 574 Pfam Protein kinase domain 293 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00282 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Arst5g00282 574 Gene3D Transferase(Phosphotransferase) domain 1 367 564 - -
Arst5g00282 574 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 75 195 - -
Arst5g00282 574 SMART serkin_6 291 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00282 574 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 367 569 - -
Arst5g00282 574 ProSiteProfiles Protein kinase domain profile. 291 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00282 Arst-Chr5 2445899 2454681 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00282 6 567 Receptor kinase-like Gene Family AT2G35620 72.867 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Arst5g00282 Pkinase 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00282 - - gmx:100819230 1011.91